Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zc3hc1Q80YV2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Zc3hc1Q80YV2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zc3hc1Q80YV2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.44■□□□□ 0.7
Zc3hc1Q80YV2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Zc3hc1Q80YV2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Zc3hc1Q80YV2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Zc3hc1Q80YV2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zc3hc1Q80YV2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Zc3hc1Q80YV2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zc3hc1Q80YV2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zc3hc1Q80YV2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.43■□□□□ 0.7
Zc3hc1Q80YV2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zc3hc1Q80YV2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zc3hc1Q80YV2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zc3hc1Q80YV2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zc3hc1Q80YV2 Gm44428-201ENSMUST00000204474 874 ntBASIC19.42■□□□□ 0.7
Zc3hc1Q80YV2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Zc3hc1Q80YV2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Zc3hc1Q80YV2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Zc3hc1Q80YV2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Zc3hc1Q80YV2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3hc1Q80YV2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3hc1Q80YV2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3hc1Q80YV2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3hc1Q80YV2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3hc1Q80YV2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Zc3hc1Q80YV2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3hc1Q80YV2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3hc1Q80YV2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3hc1Q80YV2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3hc1Q80YV2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3hc1Q80YV2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.4■□□□□ 0.7
Zc3hc1Q80YV2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3hc1Q80YV2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3hc1Q80YV2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.4■□□□□ 0.7
Zc3hc1Q80YV2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3hc1Q80YV2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Zc3hc1Q80YV2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3hc1Q80YV2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3hc1Q80YV2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3hc1Q80YV2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3hc1Q80YV2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3hc1Q80YV2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3hc1Q80YV2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.38■□□□□ 0.69
Zc3hc1Q80YV2 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.38■□□□□ 0.69
Zc3hc1Q80YV2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
Zc3hc1Q80YV2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Zc3hc1Q80YV2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Zc3hc1Q80YV2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3hc1Q80YV2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3hc1Q80YV2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3hc1Q80YV2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3hc1Q80YV2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3hc1Q80YV2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3hc1Q80YV2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3hc1Q80YV2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3hc1Q80YV2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3hc1Q80YV2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3hc1Q80YV2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Zc3hc1Q80YV2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3hc1Q80YV2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.36■□□□□ 0.69
Zc3hc1Q80YV2 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.36■□□□□ 0.69
Zc3hc1Q80YV2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3hc1Q80YV2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3hc1Q80YV2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3hc1Q80YV2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3hc1Q80YV2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3hc1Q80YV2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.35■□□□□ 0.69
Zc3hc1Q80YV2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3hc1Q80YV2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3hc1Q80YV2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3hc1Q80YV2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Zc3hc1Q80YV2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Zc3hc1Q80YV2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Zc3hc1Q80YV2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.34■□□□□ 0.69
Zc3hc1Q80YV2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3hc1Q80YV2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3hc1Q80YV2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Zc3hc1Q80YV2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3hc1Q80YV2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Zc3hc1Q80YV2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Zc3hc1Q80YV2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Zc3hc1Q80YV2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Zc3hc1Q80YV2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3hc1Q80YV2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3hc1Q80YV2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3hc1Q80YV2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Zc3hc1Q80YV2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3hc1Q80YV2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Zc3hc1Q80YV2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3hc1Q80YV2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Zc3hc1Q80YV2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.32■□□□□ 0.68
Zc3hc1Q80YV2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.32■□□□□ 0.68
Zc3hc1Q80YV2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3hc1Q80YV2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Zc3hc1Q80YV2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3hc1Q80YV2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3hc1Q80YV2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3hc1Q80YV2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms