Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.17■■□□□ 1.14
Prpf38bQ80SY5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Prpf38bQ80SY5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Prpf38bQ80SY5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Prpf38bQ80SY5 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.17■■□□□ 1.14
Prpf38bQ80SY5 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.17■■□□□ 1.14
Prpf38bQ80SY5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.17■■□□□ 1.14
Prpf38bQ80SY5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Prpf38bQ80SY5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf38bQ80SY5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf38bQ80SY5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf38bQ80SY5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf38bQ80SY5 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.16■■□□□ 1.14
Prpf38bQ80SY5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf38bQ80SY5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Prpf38bQ80SY5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf38bQ80SY5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf38bQ80SY5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf38bQ80SY5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Prpf38bQ80SY5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Prpf38bQ80SY5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Prpf38bQ80SY5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Prpf38bQ80SY5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.14■■□□□ 1.13
Prpf38bQ80SY5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Prpf38bQ80SY5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Prpf38bQ80SY5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Prpf38bQ80SY5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Prpf38bQ80SY5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Prpf38bQ80SY5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Prpf38bQ80SY5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.13■■□□□ 1.13
Prpf38bQ80SY5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Prpf38bQ80SY5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Prpf38bQ80SY5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Prpf38bQ80SY5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf38bQ80SY5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf38bQ80SY5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf38bQ80SY5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Prpf38bQ80SY5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf38bQ80SY5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Prpf38bQ80SY5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf38bQ80SY5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Prpf38bQ80SY5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Prpf38bQ80SY5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.1■■□□□ 1.13
Prpf38bQ80SY5 Gm45417-201ENSMUST00000209533 758 ntBASIC22.1■■□□□ 1.13
Prpf38bQ80SY5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Prpf38bQ80SY5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Prpf38bQ80SY5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Prpf38bQ80SY5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf38bQ80SY5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf38bQ80SY5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf38bQ80SY5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Prpf38bQ80SY5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf38bQ80SY5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.09■■□□□ 1.13
Prpf38bQ80SY5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf38bQ80SY5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf38bQ80SY5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf38bQ80SY5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf38bQ80SY5 Notumos-201ENSMUST00000151998 2659 ntBASIC22.09■■□□□ 1.13
Prpf38bQ80SY5 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.08■■□□□ 1.13
Prpf38bQ80SY5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Prpf38bQ80SY5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Prpf38bQ80SY5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Prpf38bQ80SY5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.08■■□□□ 1.13
Prpf38bQ80SY5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Prpf38bQ80SY5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Prpf38bQ80SY5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.08■■□□□ 1.12
Prpf38bQ80SY5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Prpf38bQ80SY5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.07■■□□□ 1.12
Prpf38bQ80SY5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Prpf38bQ80SY5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
Prpf38bQ80SY5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Prpf38bQ80SY5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Prpf38bQ80SY5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf38bQ80SY5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.06■■□□□ 1.12
Prpf38bQ80SY5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
Prpf38bQ80SY5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf38bQ80SY5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf38bQ80SY5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
Prpf38bQ80SY5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf38bQ80SY5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf38bQ80SY5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Prpf38bQ80SY5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.05■■□□□ 1.12
Prpf38bQ80SY5 Gm40881-201ENSMUST00000223397 166 ntBASIC22.05■■□□□ 1.12
Prpf38bQ80SY5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Prpf38bQ80SY5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Prpf38bQ80SY5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Prpf38bQ80SY5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Prpf38bQ80SY5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Prpf38bQ80SY5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Prpf38bQ80SY5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.04■■□□□ 1.12
Prpf38bQ80SY5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Prpf38bQ80SY5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Prpf38bQ80SY5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Prpf38bQ80SY5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Prpf38bQ80SY5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.03■■□□□ 1.12
Prpf38bQ80SY5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.03■■□□□ 1.12
Prpf38bQ80SY5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Prpf38bQ80SY5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Prpf38bQ80SY5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Prpf38bQ80SY5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms