Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-1Q5R1I8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-1Q5R1I8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-1Q5R1I8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-1Q5R1I8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-1Q5R1I8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trav3-1Q5R1I8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-1Q5R1I8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-1Q5R1I8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-1Q5R1I8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-1Q5R1I8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-1Q5R1I8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Trav3-1Q5R1I8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-1Q5R1I8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Trav3-1Q5R1I8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-1Q5R1I8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-1Q5R1I8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-1Q5R1I8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-1Q5R1I8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-1Q5R1I8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-1Q5R1I8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav3-1Q5R1I8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav3-1Q5R1I8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-1Q5R1I8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-1Q5R1I8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trav3-1Q5R1I8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-1Q5R1I8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav3-1Q5R1I8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-1Q5R1I8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-1Q5R1I8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-1Q5R1I8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav3-1Q5R1I8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Trav3-1Q5R1I8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav3-1Q5R1I8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-1Q5R1I8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-1Q5R1I8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav3-1Q5R1I8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-1Q5R1I8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav3-1Q5R1I8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-1Q5R1I8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-1Q5R1I8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav3-1Q5R1I8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-1Q5R1I8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-1Q5R1I8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-1Q5R1I8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-1Q5R1I8 Pcf11-205ENSMUST00000208255 1720 ntBASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-1Q5R1I8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3-1Q5R1I8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3-1Q5R1I8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Trav3-1Q5R1I8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3-1Q5R1I8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3-1Q5R1I8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Trav3-1Q5R1I8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav3-1Q5R1I8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav3-1Q5R1I8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 1219.9 ms