Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx6-3Q3UHX8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx6-3Q3UHX8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx6-3Q3UHX8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx6-3Q3UHX8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx6-3Q3UHX8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nkx6-3Q3UHX8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nkx6-3Q3UHX8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nkx6-3Q3UHX8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nkx6-3Q3UHX8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx6-3Q3UHX8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx6-3Q3UHX8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx6-3Q3UHX8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx6-3Q3UHX8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Nkx6-3Q3UHX8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx6-3Q3UHX8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx6-3Q3UHX8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx6-3Q3UHX8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nkx6-3Q3UHX8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx6-3Q3UHX8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-3Q3UHX8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.25■□□□□ 0.83
Nkx6-3Q3UHX8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.25■□□□□ 0.83
Nkx6-3Q3UHX8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-3Q3UHX8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.25■□□□□ 0.83
Nkx6-3Q3UHX8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-3Q3UHX8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-3Q3UHX8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nkx6-3Q3UHX8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-3Q3UHX8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx6-3Q3UHX8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx6-3Q3UHX8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx6-3Q3UHX8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Nkx6-3Q3UHX8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx6-3Q3UHX8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.23■□□□□ 0.83
Nkx6-3Q3UHX8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx6-3Q3UHX8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx6-3Q3UHX8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.23■□□□□ 0.83
Nkx6-3Q3UHX8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx6-3Q3UHX8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.23■□□□□ 0.83
Nkx6-3Q3UHX8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx6-3Q3UHX8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx6-3Q3UHX8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx6-3Q3UHX8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Nkx6-3Q3UHX8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx6-3Q3UHX8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.22■□□□□ 0.83
Nkx6-3Q3UHX8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx6-3Q3UHX8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx6-3Q3UHX8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx6-3Q3UHX8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nkx6-3Q3UHX8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx6-3Q3UHX8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.21■□□□□ 0.83
Nkx6-3Q3UHX8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.21■□□□□ 0.83
Nkx6-3Q3UHX8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx6-3Q3UHX8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx6-3Q3UHX8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-3Q3UHX8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-3Q3UHX8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.2■□□□□ 0.82
Nkx6-3Q3UHX8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.2■□□□□ 0.82
Nkx6-3Q3UHX8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nkx6-3Q3UHX8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-3Q3UHX8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-3Q3UHX8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-3Q3UHX8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-3Q3UHX8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nkx6-3Q3UHX8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx6-3Q3UHX8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.19■□□□□ 0.82
Nkx6-3Q3UHX8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-3Q3UHX8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-3Q3UHX8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-3Q3UHX8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.19■□□□□ 0.82
Nkx6-3Q3UHX8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-3Q3UHX8 Gm9959-201ENSMUST00000068277 390 ntBASIC20.19■□□□□ 0.82
Nkx6-3Q3UHX8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-3Q3UHX8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx6-3Q3UHX8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.19■□□□□ 0.82
Nkx6-3Q3UHX8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx6-3Q3UHX8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.18■□□□□ 0.82
Nkx6-3Q3UHX8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx6-3Q3UHX8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx6-3Q3UHX8 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.18■□□□□ 0.82
Nkx6-3Q3UHX8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.18■□□□□ 0.82
Nkx6-3Q3UHX8 Rps24-207ENSMUST00000224568 714 ntBASIC20.18■□□□□ 0.82
Nkx6-3Q3UHX8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx6-3Q3UHX8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx6-3Q3UHX8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nkx6-3Q3UHX8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.17■□□□□ 0.82
Nkx6-3Q3UHX8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx6-3Q3UHX8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx6-3Q3UHX8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nkx6-3Q3UHX8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx6-3Q3UHX8 Gm45102-201ENSMUST00000207427 857 ntBASIC20.17■□□□□ 0.82
Nkx6-3Q3UHX8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx6-3Q3UHX8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx6-3Q3UHX8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.16■□□□□ 0.82
Nkx6-3Q3UHX8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx6-3Q3UHX8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx6-3Q3UHX8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.16■□□□□ 0.82
Nkx6-3Q3UHX8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.16■□□□□ 0.82
Nkx6-3Q3UHX8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx6-3Q3UHX8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms