Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp25Q3U435 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp25Q3U435 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Mmp25Q3U435 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.12■□□□□ 0.81
Mmp25Q3U435 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp25Q3U435 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.12■□□□□ 0.81
Mmp25Q3U435 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp25Q3U435 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp25Q3U435 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp25Q3U435 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp25Q3U435 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp25Q3U435 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp25Q3U435 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp25Q3U435 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp25Q3U435 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp25Q3U435 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp25Q3U435 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp25Q3U435 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp25Q3U435 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp25Q3U435 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp25Q3U435 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.1■□□□□ 0.81
Mmp25Q3U435 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Mmp25Q3U435 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp25Q3U435 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp25Q3U435 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp25Q3U435 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp25Q3U435 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp25Q3U435 Gm15820-201ENSMUST00000201566 728 ntBASIC20.09■□□□□ 0.81
Mmp25Q3U435 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp25Q3U435 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp25Q3U435 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp25Q3U435 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp25Q3U435 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mmp25Q3U435 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.08■□□□□ 0.8
Mmp25Q3U435 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp25Q3U435 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.07■□□□□ 0.8
Mmp25Q3U435 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp25Q3U435 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp25Q3U435 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.07■□□□□ 0.8
Mmp25Q3U435 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp25Q3U435 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp25Q3U435 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.06■□□□□ 0.8
Mmp25Q3U435 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp25Q3U435 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp25Q3U435 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.05■□□□□ 0.8
Mmp25Q3U435 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp25Q3U435 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp25Q3U435 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.05■□□□□ 0.8
Mmp25Q3U435 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp25Q3U435 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp25Q3U435 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.04■□□□□ 0.8
Mmp25Q3U435 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.04■□□□□ 0.8
Mmp25Q3U435 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.04■□□□□ 0.8
Mmp25Q3U435 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp25Q3U435 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp25Q3U435 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp25Q3U435 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp25Q3U435 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp25Q3U435 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Mmp25Q3U435 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp25Q3U435 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Mmp25Q3U435 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Mmp25Q3U435 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp25Q3U435 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Mmp25Q3U435 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp25Q3U435 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Mmp25Q3U435 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp25Q3U435 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.02■□□□□ 0.8
Mmp25Q3U435 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Mmp25Q3U435 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.02■□□□□ 0.8
Mmp25Q3U435 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp25Q3U435 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp25Q3U435 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp25Q3U435 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp25Q3U435 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp25Q3U435 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Mmp25Q3U435 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.01■□□□□ 0.79
Mmp25Q3U435 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.01■□□□□ 0.79
Mmp25Q3U435 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.01■□□□□ 0.79
Mmp25Q3U435 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20■□□□□ 0.79
Mmp25Q3U435 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20■□□□□ 0.79
Mmp25Q3U435 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20■□□□□ 0.79
Mmp25Q3U435 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp25Q3U435 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp25Q3U435 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp25Q3U435 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp25Q3U435 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp25Q3U435 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20■□□□□ 0.79
Mmp25Q3U435 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp25Q3U435 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Mmp25Q3U435 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp25Q3U435 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.99■□□□□ 0.79
Mmp25Q3U435 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp25Q3U435 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp25Q3U435 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp25Q3U435 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Mmp25Q3U435 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp25Q3U435 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Mmp25Q3U435 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Mmp25Q3U435 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms