Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.66■□□□□ 0.74
Col10a1Q05306 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col10a1Q05306 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col10a1Q05306 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.65■□□□□ 0.74
Col10a1Q05306 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col10a1Q05306 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Col10a1Q05306 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col10a1Q05306 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col10a1Q05306 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col10a1Q05306 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col10a1Q05306 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Col10a1Q05306 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Col10a1Q05306 Gm43566-201ENSMUST00000196851 808 ntBASIC19.64■□□□□ 0.73
Col10a1Q05306 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.64■□□□□ 0.73
Col10a1Q05306 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.64■□□□□ 0.73
Col10a1Q05306 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col10a1Q05306 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.64■□□□□ 0.73
Col10a1Q05306 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col10a1Q05306 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col10a1Q05306 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col10a1Q05306 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Col10a1Q05306 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col10a1Q05306 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col10a1Q05306 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col10a1Q05306 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Col10a1Q05306 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col10a1Q05306 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col10a1Q05306 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.62■□□□□ 0.73
Col10a1Q05306 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.62■□□□□ 0.73
Col10a1Q05306 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Col10a1Q05306 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col10a1Q05306 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col10a1Q05306 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col10a1Q05306 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col10a1Q05306 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col10a1Q05306 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col10a1Q05306 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col10a1Q05306 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col10a1Q05306 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
Col10a1Q05306 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Col10a1Q05306 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col10a1Q05306 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col10a1Q05306 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col10a1Q05306 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.6■□□□□ 0.73
Col10a1Q05306 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col10a1Q05306 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col10a1Q05306 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.6■□□□□ 0.73
Col10a1Q05306 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col10a1Q05306 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col10a1Q05306 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col10a1Q05306 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.6■□□□□ 0.73
Col10a1Q05306 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col10a1Q05306 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col10a1Q05306 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Col10a1Q05306 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col10a1Q05306 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col10a1Q05306 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col10a1Q05306 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Col10a1Q05306 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.58■□□□□ 0.73
Col10a1Q05306 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col10a1Q05306 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Col10a1Q05306 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.58■□□□□ 0.72
Col10a1Q05306 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col10a1Q05306 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col10a1Q05306 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.57■□□□□ 0.72
Col10a1Q05306 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col10a1Q05306 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Col10a1Q05306 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col10a1Q05306 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col10a1Q05306 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.56■□□□□ 0.72
Col10a1Q05306 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col10a1Q05306 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col10a1Q05306 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.56■□□□□ 0.72
Col10a1Q05306 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col10a1Q05306 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col10a1Q05306 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col10a1Q05306 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col10a1Q05306 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col10a1Q05306 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col10a1Q05306 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col10a1Q05306 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col10a1Q05306 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col10a1Q05306 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col10a1Q05306 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col10a1Q05306 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.54■□□□□ 0.72
Col10a1Q05306 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col10a1Q05306 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col10a1Q05306 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Col10a1Q05306 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col10a1Q05306 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Col10a1Q05306 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col10a1Q05306 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col10a1Q05306 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.53■□□□□ 0.72
Col10a1Q05306 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col10a1Q05306 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col10a1Q05306 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col10a1Q05306 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Col10a1Q05306 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.52■□□□□ 0.72
Col10a1Q05306 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.52■□□□□ 0.72
Col10a1Q05306 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms