Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.07■□□□□ 0.8
Nkx3-2P97503 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.07■□□□□ 0.8
Nkx3-2P97503 Gm9959-201ENSMUST00000068277 390 ntBASIC20.07■□□□□ 0.8
Nkx3-2P97503 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx3-2P97503 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Nkx3-2P97503 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Nkx3-2P97503 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx3-2P97503 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx3-2P97503 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx3-2P97503 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx3-2P97503 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx3-2P97503 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx3-2P97503 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Nkx3-2P97503 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx3-2P97503 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx3-2P97503 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx3-2P97503 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx3-2P97503 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx3-2P97503 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nkx3-2P97503 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx3-2P97503 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.04■□□□□ 0.8
Nkx3-2P97503 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx3-2P97503 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.04■□□□□ 0.8
Nkx3-2P97503 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.04■□□□□ 0.8
Nkx3-2P97503 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.04■□□□□ 0.8
Nkx3-2P97503 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx3-2P97503 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.04■□□□□ 0.8
Nkx3-2P97503 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx3-2P97503 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx3-2P97503 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx3-2P97503 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx3-2P97503 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx3-2P97503 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx3-2P97503 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.03■□□□□ 0.8
Nkx3-2P97503 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx3-2P97503 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
Nkx3-2P97503 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Nkx3-2P97503 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.02■□□□□ 0.8
Nkx3-2P97503 Gm14117-201ENSMUST00000122417 843 ntBASIC20.02■□□□□ 0.8
Nkx3-2P97503 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.02■□□□□ 0.8
Nkx3-2P97503 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx3-2P97503 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Nkx3-2P97503 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nkx3-2P97503 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.01■□□□□ 0.79
Nkx3-2P97503 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx3-2P97503 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx3-2P97503 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx3-2P97503 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20■□□□□ 0.79
Nkx3-2P97503 Gm5131-201ENSMUST00000212776 1238 ntBASIC20■□□□□ 0.79
Nkx3-2P97503 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx3-2P97503 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20■□□□□ 0.79
Nkx3-2P97503 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx3-2P97503 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx3-2P97503 Gm28536-201ENSMUST00000190971 1317 ntBASIC20■□□□□ 0.79
Nkx3-2P97503 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx3-2P97503 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nkx3-2P97503 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx3-2P97503 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx3-2P97503 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.99■□□□□ 0.79
Nkx3-2P97503 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx3-2P97503 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Nkx3-2P97503 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx3-2P97503 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx3-2P97503 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx3-2P97503 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx3-2P97503 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx3-2P97503 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.98■□□□□ 0.79
Nkx3-2P97503 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx3-2P97503 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx3-2P97503 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx3-2P97503 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx3-2P97503 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx3-2P97503 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx3-2P97503 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Nkx3-2P97503 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.97■□□□□ 0.79
Nkx3-2P97503 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx3-2P97503 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx3-2P97503 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx3-2P97503 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Nkx3-2P97503 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.96■□□□□ 0.79
Nkx3-2P97503 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx3-2P97503 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx3-2P97503 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx3-2P97503 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Nkx3-2P97503 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.95■□□□□ 0.79
Nkx3-2P97503 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.95■□□□□ 0.78
Nkx3-2P97503 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.95■□□□□ 0.78
Nkx3-2P97503 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx3-2P97503 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx3-2P97503 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.94■□□□□ 0.78
Nkx3-2P97503 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx3-2P97503 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
Nkx3-2P97503 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx3-2P97503 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx3-2P97503 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.94■□□□□ 0.78
Nkx3-2P97503 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx3-2P97503 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.94■□□□□ 0.78
Nkx3-2P97503 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx3-2P97503 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx3-2P97503 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms