Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.53■□□□□ 0.72
SgcdP82347 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SgcdP82347 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SgcdP82347 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.52■□□□□ 0.72
SgcdP82347 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SgcdP82347 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SgcdP82347 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.51■□□□□ 0.71
SgcdP82347 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcdP82347 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SgcdP82347 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcdP82347 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcdP82347 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SgcdP82347 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcdP82347 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcdP82347 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.51■□□□□ 0.71
SgcdP82347 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcdP82347 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SgcdP82347 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SgcdP82347 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.5■□□□□ 0.71
SgcdP82347 Gm12366-201ENSMUST00000121722 873 ntBASIC19.5■□□□□ 0.71
SgcdP82347 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.5■□□□□ 0.71
SgcdP82347 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.5■□□□□ 0.71
SgcdP82347 Gm5786-201ENSMUST00000085368 882 ntBASIC19.5■□□□□ 0.71
SgcdP82347 Gm4799-201ENSMUST00000095396 657 ntBASIC19.5■□□□□ 0.71
SgcdP82347 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SgcdP82347 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SgcdP82347 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SgcdP82347 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
SgcdP82347 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SgcdP82347 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcdP82347 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcdP82347 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SgcdP82347 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcdP82347 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcdP82347 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SgcdP82347 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcdP82347 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcdP82347 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.49■□□□□ 0.71
SgcdP82347 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SgcdP82347 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SgcdP82347 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SgcdP82347 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SgcdP82347 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.48■□□□□ 0.71
SgcdP82347 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
SgcdP82347 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SgcdP82347 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SgcdP82347 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SgcdP82347 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SgcdP82347 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.47■□□□□ 0.71
SgcdP82347 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SgcdP82347 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SgcdP82347 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.47■□□□□ 0.71
SgcdP82347 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SgcdP82347 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SgcdP82347 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SgcdP82347 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SgcdP82347 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SgcdP82347 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SgcdP82347 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SgcdP82347 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SgcdP82347 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.46■□□□□ 0.71
SgcdP82347 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcdP82347 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.45■□□□□ 0.7
SgcdP82347 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcdP82347 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.45■□□□□ 0.7
SgcdP82347 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcdP82347 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcdP82347 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.45■□□□□ 0.7
SgcdP82347 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcdP82347 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcdP82347 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SgcdP82347 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SgcdP82347 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SgcdP82347 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SgcdP82347 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SgcdP82347 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SgcdP82347 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SgcdP82347 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SgcdP82347 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SgcdP82347 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SgcdP82347 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SgcdP82347 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SgcdP82347 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SgcdP82347 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SgcdP82347 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SgcdP82347 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SgcdP82347 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
SgcdP82347 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SgcdP82347 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.42■□□□□ 0.7
SgcdP82347 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.42■□□□□ 0.7
SgcdP82347 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SgcdP82347 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SgcdP82347 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SgcdP82347 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SgcdP82347 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SgcdP82347 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SgcdP82347 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SgcdP82347 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SgcdP82347 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcdP82347 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 252.6 ms