Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd27P41272 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.18■□□□□ 0.34
Cd27P41272 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd27P41272 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd27P41272 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd27P41272 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd27P41272 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd27P41272 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd27P41272 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cd27P41272 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd27P41272 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cd27P41272 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd27P41272 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Cd27P41272 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Cd27P41272 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd27P41272 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cd27P41272 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.16■□□□□ 0.34
Cd27P41272 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd27P41272 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cd27P41272 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cd27P41272 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd27P41272 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cd27P41272 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cd27P41272 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cd27P41272 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd27P41272 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd27P41272 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cd27P41272 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd27P41272 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd27P41272 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd27P41272 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cd27P41272 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cd27P41272 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cd27P41272 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd27P41272 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.14■□□□□ 0.33
Cd27P41272 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.14■□□□□ 0.33
Cd27P41272 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cd27P41272 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd27P41272 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd27P41272 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cd27P41272 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cd27P41272 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd27P41272 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd27P41272 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd27P41272 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd27P41272 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd27P41272 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd27P41272 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd27P41272 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.13■□□□□ 0.33
Cd27P41272 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cd27P41272 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.13■□□□□ 0.33
Cd27P41272 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd27P41272 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd27P41272 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd27P41272 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd27P41272 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.12■□□□□ 0.33
Cd27P41272 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd27P41272 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd27P41272 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd27P41272 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.11■□□□□ 0.33
Cd27P41272 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd27P41272 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cd27P41272 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd27P41272 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd27P41272 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd27P41272 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cd27P41272 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd27P41272 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd27P41272 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd27P41272 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd27P41272 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd27P41272 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd27P41272 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd27P41272 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.1■□□□□ 0.33
Cd27P41272 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd27P41272 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cd27P41272 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.1■□□□□ 0.33
Cd27P41272 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd27P41272 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd27P41272 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cd27P41272 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd27P41272 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.09■□□□□ 0.33
Cd27P41272 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd27P41272 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd27P41272 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd27P41272 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd27P41272 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd27P41272 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Cd27P41272 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd27P41272 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd27P41272 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Cd27P41272 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cd27P41272 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cd27P41272 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cd27P41272 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cd27P41272 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.08■□□□□ 0.32
Cd27P41272 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.07■□□□□ 0.32
Cd27P41272 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd27P41272 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.07■□□□□ 0.32
Cd27P41272 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms