Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Slc6a1P31648 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Slc6a1P31648 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.23■□□□□ 0.51
Slc6a1P31648 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a1P31648 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a1P31648 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Slc6a1P31648 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Slc6a1P31648 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a1P31648 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a1P31648 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a1P31648 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Slc6a1P31648 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Slc6a1P31648 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a1P31648 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a1P31648 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a1P31648 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a1P31648 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a1P31648 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a1P31648 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a1P31648 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Slc6a1P31648 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a1P31648 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a1P31648 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a1P31648 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.21■□□□□ 0.51
Slc6a1P31648 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a1P31648 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a1P31648 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a1P31648 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Slc6a1P31648 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a1P31648 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.2■□□□□ 0.5
Slc6a1P31648 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a1P31648 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a1P31648 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a1P31648 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a1P31648 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a1P31648 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a1P31648 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a1P31648 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a1P31648 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Slc6a1P31648 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a1P31648 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Slc6a1P31648 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.18■□□□□ 0.5
Slc6a1P31648 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a1P31648 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a1P31648 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a1P31648 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a1P31648 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Slc6a1P31648 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Slc6a1P31648 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a1P31648 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a1P31648 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a1P31648 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a1P31648 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a1P31648 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a1P31648 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a1P31648 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a1P31648 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a1P31648 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a1P31648 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a1P31648 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a1P31648 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a1P31648 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.15■□□□□ 0.5
Slc6a1P31648 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a1P31648 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a1P31648 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slc6a1P31648 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slc6a1P31648 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Slc6a1P31648 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a1P31648 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a1P31648 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Slc6a1P31648 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.14■□□□□ 0.49
Slc6a1P31648 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.14■□□□□ 0.49
Slc6a1P31648 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a1P31648 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a1P31648 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a1P31648 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.13■□□□□ 0.49
Slc6a1P31648 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Slc6a1P31648 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a1P31648 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.13■□□□□ 0.49
Slc6a1P31648 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a1P31648 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a1P31648 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a1P31648 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a1P31648 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Slc6a1P31648 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.12■□□□□ 0.49
Slc6a1P31648 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a1P31648 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a1P31648 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a1P31648 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a1P31648 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a1P31648 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a1P31648 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a1P31648 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a1P31648 Golph3-202ENSMUST00000226517 2359 ntBASIC18.11■□□□□ 0.49
Slc6a1P31648 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a1P31648 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a1P31648 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a1P31648 Mir6538-201ENSMUST00000183713 110 ntBASIC18.11■□□□□ 0.49
Slc6a1P31648 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a1P31648 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms