Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04944 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04944 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04944 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
P04944 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04944 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P04944 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
P04944 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
P04944 Gm7332-201ENSMUST00000118351 454 ntBASIC16.58■□□□□ 0.24
P04944 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04944 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.58■□□□□ 0.24
P04944 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P04944 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04944 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04944 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04944 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04944 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P04944 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04944 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04944 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P04944 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04944 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04944 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04944 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04944 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.57■□□□□ 0.24
P04944 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
P04944 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04944 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04944 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04944 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.56■□□□□ 0.24
P04944 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.56■□□□□ 0.24
P04944 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04944 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04944 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
P04944 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04944 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04944 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
P04944 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04944 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
P04944 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
P04944 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04944 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04944 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.55■□□□□ 0.24
P04944 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04944 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04944 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.54■□□□□ 0.24
P04944 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.54■□□□□ 0.24
P04944 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04944 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04944 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04944 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04944 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
P04944 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04944 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04944 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.54■□□□□ 0.24
P04944 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.53■□□□□ 0.24
P04944 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.53■□□□□ 0.24
P04944 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
P04944 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
P04944 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04944 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04944 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
P04944 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
P04944 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04944 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
P04944 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04944 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04944 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04944 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
P04944 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
P04944 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
P04944 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.51■□□□□ 0.23
P04944 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04944 Mir6538-201ENSMUST00000183713 110 ntBASIC16.51■□□□□ 0.23
P04944 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.51■□□□□ 0.23
P04944 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04944 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.51■□□□□ 0.23
P04944 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
P04944 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04944 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P04944 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.5■□□□□ 0.23
P04944 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.5■□□□□ 0.23
P04944 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04944 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
P04944 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04944 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04944 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.49■□□□□ 0.23
P04944 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms