Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CfdP03953 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CfdP03953 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CfdP03953 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CfdP03953 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CfdP03953 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CfdP03953 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.8■□□□□ 0.44
CfdP03953 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CfdP03953 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CfdP03953 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CfdP03953 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.79■□□□□ 0.44
CfdP03953 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CfdP03953 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CfdP03953 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.79■□□□□ 0.44
CfdP03953 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.79■□□□□ 0.44
CfdP03953 Terc-201ENSMUST00000082862 423 ntBASIC17.79■□□□□ 0.44
CfdP03953 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CfdP03953 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CfdP03953 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CfdP03953 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CfdP03953 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.78■□□□□ 0.44
CfdP03953 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CfdP03953 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CfdP03953 Iqck-206ENSMUST00000208658 2891 ntBASIC17.77■□□□□ 0.44
CfdP03953 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CfdP03953 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CfdP03953 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CfdP03953 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.77■□□□□ 0.44
CfdP03953 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.77■□□□□ 0.44
CfdP03953 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.77■□□□□ 0.44
CfdP03953 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CfdP03953 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CfdP03953 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CfdP03953 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CfdP03953 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.76■□□□□ 0.43
CfdP03953 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.76■□□□□ 0.43
CfdP03953 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.76■□□□□ 0.43
CfdP03953 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.76■□□□□ 0.43
CfdP03953 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CfdP03953 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CfdP03953 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CfdP03953 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CfdP03953 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CfdP03953 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CfdP03953 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CfdP03953 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CfdP03953 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CfdP03953 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CfdP03953 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CfdP03953 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CfdP03953 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
CfdP03953 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CfdP03953 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CfdP03953 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CfdP03953 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CfdP03953 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CfdP03953 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CfdP03953 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.73■□□□□ 0.43
CfdP03953 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.73■□□□□ 0.43
CfdP03953 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CfdP03953 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CfdP03953 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.72■□□□□ 0.43
CfdP03953 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CfdP03953 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CfdP03953 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CfdP03953 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CfdP03953 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CfdP03953 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.72■□□□□ 0.43
CfdP03953 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.72■□□□□ 0.43
CfdP03953 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CfdP03953 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CfdP03953 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CfdP03953 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CfdP03953 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CfdP03953 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CfdP03953 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CfdP03953 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CfdP03953 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CfdP03953 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CfdP03953 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CfdP03953 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CfdP03953 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CfdP03953 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CfdP03953 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CfdP03953 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CfdP03953 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CfdP03953 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.71■□□□□ 0.43
CfdP03953 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CfdP03953 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CfdP03953 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CfdP03953 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CfdP03953 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CfdP03953 Mir3960-201ENSMUST00000198213 73 ntBASIC17.7■□□□□ 0.42
CfdP03953 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CfdP03953 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CfdP03953 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CfdP03953 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CfdP03953 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CfdP03953 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CfdP03953 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms