Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnkO88874 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.74■□□□□ 0.59
CcnkO88874 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CcnkO88874 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CcnkO88874 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.74■□□□□ 0.59
CcnkO88874 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CcnkO88874 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CcnkO88874 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CcnkO88874 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CcnkO88874 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CcnkO88874 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.73■□□□□ 0.59
CcnkO88874 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CcnkO88874 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.73■□□□□ 0.59
CcnkO88874 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CcnkO88874 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CcnkO88874 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CcnkO88874 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.72■□□□□ 0.59
CcnkO88874 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CcnkO88874 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CcnkO88874 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CcnkO88874 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CcnkO88874 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CcnkO88874 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CcnkO88874 Gm9806-201ENSMUST00000051080 552 ntBASIC18.71■□□□□ 0.59
CcnkO88874 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CcnkO88874 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CcnkO88874 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CcnkO88874 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CcnkO88874 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CcnkO88874 Scarna2-201ENSMUST00000157560 414 ntBASIC18.7■□□□□ 0.58
CcnkO88874 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.7■□□□□ 0.58
CcnkO88874 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CcnkO88874 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.7■□□□□ 0.58
CcnkO88874 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CcnkO88874 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CcnkO88874 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CcnkO88874 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CcnkO88874 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CcnkO88874 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CcnkO88874 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CcnkO88874 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CcnkO88874 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CcnkO88874 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CcnkO88874 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CcnkO88874 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CcnkO88874 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CcnkO88874 Gm44428-201ENSMUST00000204474 874 ntBASIC18.68■□□□□ 0.58
CcnkO88874 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CcnkO88874 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CcnkO88874 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CcnkO88874 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CcnkO88874 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CcnkO88874 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CcnkO88874 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CcnkO88874 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CcnkO88874 Gm16437-201ENSMUST00000025669 507 ntBASIC18.67■□□□□ 0.58
CcnkO88874 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CcnkO88874 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CcnkO88874 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CcnkO88874 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CcnkO88874 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CcnkO88874 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CcnkO88874 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CcnkO88874 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CcnkO88874 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CcnkO88874 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CcnkO88874 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CcnkO88874 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CcnkO88874 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CcnkO88874 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CcnkO88874 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CcnkO88874 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CcnkO88874 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CcnkO88874 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CcnkO88874 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CcnkO88874 Gm11687-201ENSMUST00000118911 886 ntBASIC18.64■□□□□ 0.57
CcnkO88874 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CcnkO88874 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CcnkO88874 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CcnkO88874 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CcnkO88874 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CcnkO88874 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CcnkO88874 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.63■□□□□ 0.57
CcnkO88874 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CcnkO88874 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CcnkO88874 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CcnkO88874 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.63■□□□□ 0.57
CcnkO88874 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CcnkO88874 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CcnkO88874 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CcnkO88874 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.62■□□□□ 0.57
CcnkO88874 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CcnkO88874 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CcnkO88874 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms