Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Shisa8J3QNX5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shisa8J3QNX5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shisa8J3QNX5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.38■□□□□ 0.69
Shisa8J3QNX5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shisa8J3QNX5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shisa8J3QNX5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shisa8J3QNX5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shisa8J3QNX5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa8J3QNX5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shisa8J3QNX5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shisa8J3QNX5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shisa8J3QNX5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Shisa8J3QNX5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shisa8J3QNX5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa8J3QNX5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa8J3QNX5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa8J3QNX5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa8J3QNX5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa8J3QNX5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.34■□□□□ 0.69
Shisa8J3QNX5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa8J3QNX5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa8J3QNX5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.34■□□□□ 0.69
Shisa8J3QNX5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa8J3QNX5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa8J3QNX5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa8J3QNX5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Shisa8J3QNX5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shisa8J3QNX5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shisa8J3QNX5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.33■□□□□ 0.68
Shisa8J3QNX5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa8J3QNX5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa8J3QNX5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa8J3QNX5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Shisa8J3QNX5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Shisa8J3QNX5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa8J3QNX5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.32■□□□□ 0.68
Shisa8J3QNX5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa8J3QNX5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa8J3QNX5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa8J3QNX5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa8J3QNX5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa8J3QNX5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa8J3QNX5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.31■□□□□ 0.68
Shisa8J3QNX5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.3■□□□□ 0.68
Shisa8J3QNX5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Shisa8J3QNX5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa8J3QNX5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa8J3QNX5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Shisa8J3QNX5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Shisa8J3QNX5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa8J3QNX5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.3■□□□□ 0.68
Shisa8J3QNX5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa8J3QNX5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa8J3QNX5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa8J3QNX5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa8J3QNX5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa8J3QNX5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Shisa8J3QNX5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa8J3QNX5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.29■□□□□ 0.68
Shisa8J3QNX5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa8J3QNX5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa8J3QNX5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Shisa8J3QNX5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa8J3QNX5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa8J3QNX5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa8J3QNX5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa8J3QNX5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa8J3QNX5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.27■□□□□ 0.68
Shisa8J3QNX5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa8J3QNX5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.27■□□□□ 0.68
Shisa8J3QNX5 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.27■□□□□ 0.68
Shisa8J3QNX5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa8J3QNX5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa8J3QNX5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa8J3QNX5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shisa8J3QNX5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Shisa8J3QNX5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Shisa8J3QNX5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa8J3QNX5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa8J3QNX5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa8J3QNX5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Shisa8J3QNX5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Shisa8J3QNX5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa8J3QNX5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa8J3QNX5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa8J3QNX5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa8J3QNX5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms