Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm6408J3QNG1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm6408J3QNG1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm6408J3QNG1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm6408J3QNG1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm6408J3QNG1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm6408J3QNG1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm6408J3QNG1 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.25■□□□□ 0.99
Gm6408J3QNG1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm6408J3QNG1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
Gm6408J3QNG1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm6408J3QNG1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm6408J3QNG1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Gm6408J3QNG1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.24■□□□□ 0.99
Gm6408J3QNG1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm6408J3QNG1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm6408J3QNG1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm6408J3QNG1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm6408J3QNG1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm6408J3QNG1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm6408J3QNG1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm6408J3QNG1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm6408J3QNG1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm6408J3QNG1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.23■□□□□ 0.99
Gm6408J3QNG1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm6408J3QNG1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm6408J3QNG1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm6408J3QNG1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm6408J3QNG1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Gm6408J3QNG1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm6408J3QNG1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm6408J3QNG1 Gm14523-201ENSMUST00000117260 558 ntBASIC21.22■□□□□ 0.99
Gm6408J3QNG1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm6408J3QNG1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm6408J3QNG1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm6408J3QNG1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm6408J3QNG1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gm6408J3QNG1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.21■□□□□ 0.99
Gm6408J3QNG1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Gm6408J3QNG1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm6408J3QNG1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm6408J3QNG1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Gm6408J3QNG1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gm6408J3QNG1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Gm6408J3QNG1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm6408J3QNG1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm6408J3QNG1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm6408J3QNG1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm6408J3QNG1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm6408J3QNG1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm6408J3QNG1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm6408J3QNG1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm6408J3QNG1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm6408J3QNG1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm6408J3QNG1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm6408J3QNG1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Gm6408J3QNG1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.19■□□□□ 0.98
Gm6408J3QNG1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm6408J3QNG1 Gm7332-201ENSMUST00000118351 454 ntBASIC21.18■□□□□ 0.98
Gm6408J3QNG1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm6408J3QNG1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm6408J3QNG1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm6408J3QNG1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm6408J3QNG1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm6408J3QNG1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm6408J3QNG1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm6408J3QNG1 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.16■□□□□ 0.98
Gm6408J3QNG1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm6408J3QNG1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm6408J3QNG1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm6408J3QNG1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.15■□□□□ 0.98
Gm6408J3QNG1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm6408J3QNG1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Gm6408J3QNG1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm6408J3QNG1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Gm6408J3QNG1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm6408J3QNG1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.14■□□□□ 0.97
Gm6408J3QNG1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm6408J3QNG1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Gm6408J3QNG1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Gm6408J3QNG1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Gm6408J3QNG1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm6408J3QNG1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm6408J3QNG1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
Gm6408J3QNG1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Gm6408J3QNG1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm6408J3QNG1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm6408J3QNG1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm6408J3QNG1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm6408J3QNG1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.12■□□□□ 0.97
Gm6408J3QNG1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm6408J3QNG1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm6408J3QNG1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.12■□□□□ 0.97
Gm6408J3QNG1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.12■□□□□ 0.97
Gm6408J3QNG1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Gm6408J3QNG1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Gm6408J3QNG1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm6408J3QNG1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm6408J3QNG1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm6408J3QNG1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms