Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3727J3QM54 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3727J3QM54 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3727J3QM54 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.07■□□□□ 0.48
Gm3727J3QM54 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3727J3QM54 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3727J3QM54 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3727J3QM54 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3727J3QM54 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3727J3QM54 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3727J3QM54 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3727J3QM54 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3727J3QM54 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Gm3727J3QM54 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.05■□□□□ 0.48
Gm3727J3QM54 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm3727J3QM54 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3727J3QM54 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3727J3QM54 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.04■□□□□ 0.48
Gm3727J3QM54 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3727J3QM54 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3727J3QM54 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gm3727J3QM54 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3727J3QM54 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.04■□□□□ 0.48
Gm3727J3QM54 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3727J3QM54 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm3727J3QM54 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3727J3QM54 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Gm3727J3QM54 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3727J3QM54 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3727J3QM54 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3727J3QM54 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Gm3727J3QM54 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.02■□□□□ 0.48
Gm3727J3QM54 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3727J3QM54 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3727J3QM54 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3727J3QM54 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.02■□□□□ 0.48
Gm3727J3QM54 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3727J3QM54 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Gm3727J3QM54 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.02■□□□□ 0.47
Gm3727J3QM54 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3727J3QM54 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.02■□□□□ 0.47
Gm3727J3QM54 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3727J3QM54 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3727J3QM54 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3727J3QM54 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3727J3QM54 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3727J3QM54 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Gm3727J3QM54 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Gm3727J3QM54 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3727J3QM54 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3727J3QM54 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3727J3QM54 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3727J3QM54 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3727J3QM54 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3727J3QM54 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gm3727J3QM54 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm3727J3QM54 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Gm3727J3QM54 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18■□□□□ 0.47
Gm3727J3QM54 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3727J3QM54 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18■□□□□ 0.47
Gm3727J3QM54 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3727J3QM54 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3727J3QM54 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3727J3QM54 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3727J3QM54 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3727J3QM54 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3727J3QM54 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3727J3QM54 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3727J3QM54 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3727J3QM54 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3727J3QM54 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.99■□□□□ 0.47
Gm3727J3QM54 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3727J3QM54 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3727J3QM54 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3727J3QM54 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3727J3QM54 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3727J3QM54 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3727J3QM54 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3727J3QM54 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Gm3727J3QM54 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.97■□□□□ 0.47
Gm3727J3QM54 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3727J3QM54 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3727J3QM54 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm3727J3QM54 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3727J3QM54 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3727J3QM54 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Gm3727J3QM54 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3727J3QM54 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3727J3QM54 Gm45855-201ENSMUST00000212546 880 ntBASIC17.96■□□□□ 0.47
Gm3727J3QM54 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Gm3727J3QM54 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.96■□□□□ 0.47
Gm3727J3QM54 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3727J3QM54 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Gm3727J3QM54 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.96■□□□□ 0.47
Gm3727J3QM54 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3727J3QM54 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3727J3QM54 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3727J3QM54 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.95■□□□□ 0.46
Gm3727J3QM54 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3727J3QM54 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms