Protein–RNA interactions for Protein: F6VCN9

Gm5861, Predicted gene 5861 (Fragment), mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5861F6VCN9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm5861F6VCN9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm5861F6VCN9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm5861F6VCN9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm5861F6VCN9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Gm5861F6VCN9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Gm5861F6VCN9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
Gm5861F6VCN9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm5861F6VCN9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.39■□□□□ 0.85
Gm5861F6VCN9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5861F6VCN9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5861F6VCN9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5861F6VCN9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.38■□□□□ 0.85
Gm5861F6VCN9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.38■□□□□ 0.85
Gm5861F6VCN9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5861F6VCN9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5861F6VCN9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.38■□□□□ 0.85
Gm5861F6VCN9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5861F6VCN9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm5861F6VCN9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm5861F6VCN9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm5861F6VCN9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm5861F6VCN9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm5861F6VCN9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm5861F6VCN9 Gm14523-201ENSMUST00000117260 558 ntBASIC20.36■□□□□ 0.85
Gm5861F6VCN9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Gm5861F6VCN9 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.36■□□□□ 0.85
Gm5861F6VCN9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5861F6VCN9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5861F6VCN9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5861F6VCN9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5861F6VCN9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5861F6VCN9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5861F6VCN9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5861F6VCN9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.35■□□□□ 0.85
Gm5861F6VCN9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5861F6VCN9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5861F6VCN9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5861F6VCN9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5861F6VCN9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.33■□□□□ 0.85
Gm5861F6VCN9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.33■□□□□ 0.85
Gm5861F6VCN9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.33■□□□□ 0.85
Gm5861F6VCN9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.33■□□□□ 0.85
Gm5861F6VCN9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.33■□□□□ 0.85
Gm5861F6VCN9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5861F6VCN9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.33■□□□□ 0.85
Gm5861F6VCN9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.33■□□□□ 0.85
Gm5861F6VCN9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm5861F6VCN9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm5861F6VCN9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm5861F6VCN9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5861F6VCN9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5861F6VCN9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5861F6VCN9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5861F6VCN9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5861F6VCN9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.32■□□□□ 0.84
Gm5861F6VCN9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Gm5861F6VCN9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5861F6VCN9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5861F6VCN9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5861F6VCN9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5861F6VCN9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Gm5861F6VCN9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5861F6VCN9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5861F6VCN9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5861F6VCN9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5861F6VCN9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5861F6VCN9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.3■□□□□ 0.84
Gm5861F6VCN9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5861F6VCN9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Gm5861F6VCN9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5861F6VCN9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5861F6VCN9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms