Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.96■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Gm26115-201ENSMUST00000175605 87 ntBASIC15.94■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.94■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.9■□□□□ 0.14
Tcrg-V4A0A0B4J1J8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.89■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.88■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.88■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.87■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms