Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-4A0A075B6B4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-4A0A075B6B4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-4A0A075B6B4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-4A0A075B6B4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav6-4A0A075B6B4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-4A0A075B6B4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.4■□□□□ 0.22
Trav6-4A0A075B6B4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav6-4A0A075B6B4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-4A0A075B6B4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-4A0A075B6B4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-4A0A075B6B4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-4A0A075B6B4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-4A0A075B6B4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.39■□□□□ 0.21
Trav6-4A0A075B6B4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-4A0A075B6B4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-4A0A075B6B4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-4A0A075B6B4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-4A0A075B6B4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav6-4A0A075B6B4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-4A0A075B6B4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-4A0A075B6B4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-4A0A075B6B4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-4A0A075B6B4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav6-4A0A075B6B4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trav6-4A0A075B6B4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-4A0A075B6B4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-4A0A075B6B4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-4A0A075B6B4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-4A0A075B6B4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.37■□□□□ 0.21
Trav6-4A0A075B6B4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-4A0A075B6B4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-4A0A075B6B4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav6-4A0A075B6B4 Gm45444-201ENSMUST00000211394 898 ntBASIC16.36■□□□□ 0.21
Trav6-4A0A075B6B4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-4A0A075B6B4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.36■□□□□ 0.21
Trav6-4A0A075B6B4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav6-4A0A075B6B4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-4A0A075B6B4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav6-4A0A075B6B4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Trav6-4A0A075B6B4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.33■□□□□ 0.21
Trav6-4A0A075B6B4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6-4A0A075B6B4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Trav6-4A0A075B6B4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-4A0A075B6B4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav6-4A0A075B6B4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-4A0A075B6B4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-4A0A075B6B4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav6-4A0A075B6B4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav6-4A0A075B6B4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-4A0A075B6B4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-4A0A075B6B4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-4A0A075B6B4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav6-4A0A075B6B4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav6-4A0A075B6B4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-4A0A075B6B4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-4A0A075B6B4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-4A0A075B6B4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-4A0A075B6B4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-4A0A075B6B4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav6-4A0A075B6B4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-4A0A075B6B4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Trav6-4A0A075B6B4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-4A0A075B6B4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-4A0A075B6B4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-4A0A075B6B4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-4A0A075B6B4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-4A0A075B6B4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav6-4A0A075B6B4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-4A0A075B6B4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms