Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn13Q9Z0S4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn13Q9Z0S4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn13Q9Z0S4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn13Q9Z0S4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn13Q9Z0S4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn13Q9Z0S4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn13Q9Z0S4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.09■□□□□ 0.65
Cldn13Q9Z0S4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn13Q9Z0S4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn13Q9Z0S4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn13Q9Z0S4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn13Q9Z0S4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.08■□□□□ 0.65
Cldn13Q9Z0S4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn13Q9Z0S4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn13Q9Z0S4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn13Q9Z0S4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn13Q9Z0S4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cldn13Q9Z0S4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn13Q9Z0S4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cldn13Q9Z0S4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn13Q9Z0S4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn13Q9Z0S4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn13Q9Z0S4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn13Q9Z0S4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn13Q9Z0S4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn13Q9Z0S4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn13Q9Z0S4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.05■□□□□ 0.64
Cldn13Q9Z0S4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn13Q9Z0S4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn13Q9Z0S4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.05■□□□□ 0.64
Cldn13Q9Z0S4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.05■□□□□ 0.64
Cldn13Q9Z0S4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.05■□□□□ 0.64
Cldn13Q9Z0S4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn13Q9Z0S4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.04■□□□□ 0.64
Cldn13Q9Z0S4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn13Q9Z0S4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn13Q9Z0S4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cldn13Q9Z0S4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn13Q9Z0S4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn13Q9Z0S4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn13Q9Z0S4 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.04■□□□□ 0.64
Cldn13Q9Z0S4 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.04■□□□□ 0.64
Cldn13Q9Z0S4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 Gm5921-201ENSMUST00000075898 882 ntBASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn13Q9Z0S4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn13Q9Z0S4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn13Q9Z0S4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn13Q9Z0S4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn13Q9Z0S4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn13Q9Z0S4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Cldn13Q9Z0S4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn13Q9Z0S4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn13Q9Z0S4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.02■□□□□ 0.64
Cldn13Q9Z0S4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn13Q9Z0S4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn13Q9Z0S4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cldn13Q9Z0S4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cldn13Q9Z0S4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cldn13Q9Z0S4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cldn13Q9Z0S4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn13Q9Z0S4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn13Q9Z0S4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn13Q9Z0S4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cldn13Q9Z0S4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn13Q9Z0S4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
Cldn13Q9Z0S4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn13Q9Z0S4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn13Q9Z0S4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn13Q9Z0S4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn13Q9Z0S4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19■□□□□ 0.63
Cldn13Q9Z0S4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn13Q9Z0S4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn13Q9Z0S4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Cldn13Q9Z0S4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19■□□□□ 0.63
Cldn13Q9Z0S4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn13Q9Z0S4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn13Q9Z0S4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn13Q9Z0S4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn13Q9Z0S4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.99■□□□□ 0.63
Cldn13Q9Z0S4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn13Q9Z0S4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn13Q9Z0S4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn13Q9Z0S4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn13Q9Z0S4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn13Q9Z0S4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cldn13Q9Z0S4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn13Q9Z0S4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.98■□□□□ 0.63
Cldn13Q9Z0S4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn13Q9Z0S4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms