Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atp6ap1Q9R1Q9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.98■□□□□ 0.95
Atp6ap1Q9R1Q9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atp6ap1Q9R1Q9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.98■□□□□ 0.95
Atp6ap1Q9R1Q9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atp6ap1Q9R1Q9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.98■□□□□ 0.95
Atp6ap1Q9R1Q9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atp6ap1Q9R1Q9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atp6ap1Q9R1Q9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6ap1Q9R1Q9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6ap1Q9R1Q9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6ap1Q9R1Q9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6ap1Q9R1Q9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6ap1Q9R1Q9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Atp6ap1Q9R1Q9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Atp6ap1Q9R1Q9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6ap1Q9R1Q9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Atp6ap1Q9R1Q9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6ap1Q9R1Q9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Atp6ap1Q9R1Q9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6ap1Q9R1Q9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Atp6ap1Q9R1Q9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6ap1Q9R1Q9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Atp6ap1Q9R1Q9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6ap1Q9R1Q9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.95■□□□□ 0.94
Atp6ap1Q9R1Q9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.95■□□□□ 0.94
Atp6ap1Q9R1Q9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Atp6ap1Q9R1Q9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Atp6ap1Q9R1Q9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6ap1Q9R1Q9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6ap1Q9R1Q9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.94■□□□□ 0.94
Atp6ap1Q9R1Q9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.94■□□□□ 0.94
Atp6ap1Q9R1Q9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.94■□□□□ 0.94
Atp6ap1Q9R1Q9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6ap1Q9R1Q9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6ap1Q9R1Q9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6ap1Q9R1Q9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Atp6ap1Q9R1Q9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6ap1Q9R1Q9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6ap1Q9R1Q9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6ap1Q9R1Q9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6ap1Q9R1Q9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.93■□□□□ 0.94
Atp6ap1Q9R1Q9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6ap1Q9R1Q9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6ap1Q9R1Q9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6ap1Q9R1Q9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.93■□□□□ 0.94
Atp6ap1Q9R1Q9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.92■□□□□ 0.94
Atp6ap1Q9R1Q9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.92■□□□□ 0.94
Atp6ap1Q9R1Q9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.92■□□□□ 0.94
Atp6ap1Q9R1Q9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.92■□□□□ 0.94
Atp6ap1Q9R1Q9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp6ap1Q9R1Q9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Atp6ap1Q9R1Q9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp6ap1Q9R1Q9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Atp6ap1Q9R1Q9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Atp6ap1Q9R1Q9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.91■□□□□ 0.94
Atp6ap1Q9R1Q9 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.91■□□□□ 0.94
Atp6ap1Q9R1Q9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Atp6ap1Q9R1Q9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp6ap1Q9R1Q9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.9■□□□□ 0.94
Atp6ap1Q9R1Q9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6ap1Q9R1Q9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6ap1Q9R1Q9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6ap1Q9R1Q9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6ap1Q9R1Q9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.9■□□□□ 0.94
Atp6ap1Q9R1Q9 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.9■□□□□ 0.94
Atp6ap1Q9R1Q9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6ap1Q9R1Q9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6ap1Q9R1Q9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6ap1Q9R1Q9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6ap1Q9R1Q9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atp6ap1Q9R1Q9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Atp6ap1Q9R1Q9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atp6ap1Q9R1Q9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.89■□□□□ 0.93
Atp6ap1Q9R1Q9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atp6ap1Q9R1Q9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atp6ap1Q9R1Q9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atp6ap1Q9R1Q9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atp6ap1Q9R1Q9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atp6ap1Q9R1Q9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atp6ap1Q9R1Q9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.88■□□□□ 0.93
Atp6ap1Q9R1Q9 Gm5921-201ENSMUST00000075898 882 ntBASIC20.88■□□□□ 0.93
Atp6ap1Q9R1Q9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atp6ap1Q9R1Q9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atp6ap1Q9R1Q9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Atp6ap1Q9R1Q9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6ap1Q9R1Q9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6ap1Q9R1Q9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6ap1Q9R1Q9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6ap1Q9R1Q9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6ap1Q9R1Q9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6ap1Q9R1Q9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6ap1Q9R1Q9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6ap1Q9R1Q9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.87■□□□□ 0.93
Atp6ap1Q9R1Q9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6ap1Q9R1Q9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6ap1Q9R1Q9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atp6ap1Q9R1Q9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Atp6ap1Q9R1Q9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Atp6ap1Q9R1Q9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms