Protein–RNA interactions for Protein: Q9CZA6

Nde1, Nuclear distribution protein nudE homolog 1, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1Q9CZA6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nde1Q9CZA6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nde1Q9CZA6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nde1Q9CZA6 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.79■□□□□ 0.92
Nde1Q9CZA6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nde1Q9CZA6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Nde1Q9CZA6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nde1Q9CZA6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nde1Q9CZA6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.78■□□□□ 0.92
Nde1Q9CZA6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.78■□□□□ 0.92
Nde1Q9CZA6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nde1Q9CZA6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nde1Q9CZA6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Nde1Q9CZA6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nde1Q9CZA6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nde1Q9CZA6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nde1Q9CZA6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nde1Q9CZA6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Nde1Q9CZA6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nde1Q9CZA6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.77■□□□□ 0.91
Nde1Q9CZA6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nde1Q9CZA6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.76■□□□□ 0.91
Nde1Q9CZA6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nde1Q9CZA6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nde1Q9CZA6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.76■□□□□ 0.91
Nde1Q9CZA6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.76■□□□□ 0.91
Nde1Q9CZA6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nde1Q9CZA6 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.76■□□□□ 0.91
Nde1Q9CZA6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nde1Q9CZA6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nde1Q9CZA6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nde1Q9CZA6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.75■□□□□ 0.91
Nde1Q9CZA6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nde1Q9CZA6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nde1Q9CZA6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nde1Q9CZA6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Nde1Q9CZA6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nde1Q9CZA6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nde1Q9CZA6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nde1Q9CZA6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.74■□□□□ 0.91
Nde1Q9CZA6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Nde1Q9CZA6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.74■□□□□ 0.91
Nde1Q9CZA6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nde1Q9CZA6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nde1Q9CZA6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
Nde1Q9CZA6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.73■□□□□ 0.91
Nde1Q9CZA6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nde1Q9CZA6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nde1Q9CZA6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nde1Q9CZA6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nde1Q9CZA6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nde1Q9CZA6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nde1Q9CZA6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nde1Q9CZA6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Nde1Q9CZA6 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.72■□□□□ 0.91
Nde1Q9CZA6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nde1Q9CZA6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nde1Q9CZA6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nde1Q9CZA6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.71■□□□□ 0.91
Nde1Q9CZA6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.71■□□□□ 0.91
Nde1Q9CZA6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nde1Q9CZA6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Nde1Q9CZA6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nde1Q9CZA6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nde1Q9CZA6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nde1Q9CZA6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Nde1Q9CZA6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Nde1Q9CZA6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nde1Q9CZA6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nde1Q9CZA6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nde1Q9CZA6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nde1Q9CZA6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nde1Q9CZA6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nde1Q9CZA6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.69■□□□□ 0.9
Nde1Q9CZA6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Gm22567-201ENSMUST00000175542 342 ntBASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nde1Q9CZA6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nde1Q9CZA6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nde1Q9CZA6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nde1Q9CZA6 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.68■□□□□ 0.9
Nde1Q9CZA6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.68■□□□□ 0.9
Nde1Q9CZA6 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.68■□□□□ 0.9
Nde1Q9CZA6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nde1Q9CZA6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nde1Q9CZA6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nde1Q9CZA6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nde1Q9CZA6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nde1Q9CZA6 Gm6821-201ENSMUST00000107540 542 ntBASIC20.67■□□□□ 0.9
Nde1Q9CZA6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms