Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Lsm7Q9CQQ8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm7Q9CQQ8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.72■■□□□ 1.07
Lsm7Q9CQQ8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.72■■□□□ 1.07
Lsm7Q9CQQ8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Lsm7Q9CQQ8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm7Q9CQQ8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm7Q9CQQ8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Lsm7Q9CQQ8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm7Q9CQQ8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm7Q9CQQ8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm7Q9CQQ8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Lsm7Q9CQQ8 Gm14117-201ENSMUST00000122417 843 ntBASIC21.71■■□□□ 1.07
Lsm7Q9CQQ8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm7Q9CQQ8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm7Q9CQQ8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.7■■□□□ 1.07
Lsm7Q9CQQ8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm7Q9CQQ8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.7■■□□□ 1.06
Lsm7Q9CQQ8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Lsm7Q9CQQ8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm7Q9CQQ8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
Lsm7Q9CQQ8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm7Q9CQQ8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm7Q9CQQ8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Lsm7Q9CQQ8 Etf1-202ENSMUST00000180351 108 ntBASIC21.69■■□□□ 1.06
Lsm7Q9CQQ8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm7Q9CQQ8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm7Q9CQQ8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Lsm7Q9CQQ8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.68■■□□□ 1.06
Lsm7Q9CQQ8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm7Q9CQQ8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm7Q9CQQ8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Lsm7Q9CQQ8 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.68■■□□□ 1.06
Lsm7Q9CQQ8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Lsm7Q9CQQ8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm7Q9CQQ8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm7Q9CQQ8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm7Q9CQQ8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm7Q9CQQ8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm7Q9CQQ8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.67■■□□□ 1.06
Lsm7Q9CQQ8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm7Q9CQQ8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.67■■□□□ 1.06
Lsm7Q9CQQ8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm7Q9CQQ8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm7Q9CQQ8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm7Q9CQQ8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm7Q9CQQ8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm7Q9CQQ8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm7Q9CQQ8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm7Q9CQQ8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm7Q9CQQ8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm7Q9CQQ8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm7Q9CQQ8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm7Q9CQQ8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm7Q9CQQ8 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.65■■□□□ 1.06
Lsm7Q9CQQ8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm7Q9CQQ8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm7Q9CQQ8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm7Q9CQQ8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lsm7Q9CQQ8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm7Q9CQQ8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm7Q9CQQ8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm7Q9CQQ8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm7Q9CQQ8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.64■■□□□ 1.05
Lsm7Q9CQQ8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm7Q9CQQ8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Lsm7Q9CQQ8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Lsm7Q9CQQ8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lsm7Q9CQQ8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm7Q9CQQ8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.62■■□□□ 1.05
Lsm7Q9CQQ8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.62■■□□□ 1.05
Lsm7Q9CQQ8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.62■■□□□ 1.05
Lsm7Q9CQQ8 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.62■■□□□ 1.05
Lsm7Q9CQQ8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm7Q9CQQ8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.61■■□□□ 1.05
Lsm7Q9CQQ8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lsm7Q9CQQ8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lsm7Q9CQQ8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Lsm7Q9CQQ8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.61■■□□□ 1.05
Lsm7Q9CQQ8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Lsm7Q9CQQ8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lsm7Q9CQQ8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lsm7Q9CQQ8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.61■■□□□ 1.05
Lsm7Q9CQQ8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lsm7Q9CQQ8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 Gm7417-201ENSMUST00000192950 473 ntBASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lsm7Q9CQQ8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm7Q9CQQ8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm7Q9CQQ8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Lsm7Q9CQQ8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 159.1 ms