Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trim33Q99PP7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim33Q99PP7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim33Q99PP7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Trim33Q99PP7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim33Q99PP7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim33Q99PP7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim33Q99PP7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim33Q99PP7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim33Q99PP7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim33Q99PP7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim33Q99PP7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.12■□□□□ 0.97
Trim33Q99PP7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim33Q99PP7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim33Q99PP7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim33Q99PP7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim33Q99PP7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim33Q99PP7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim33Q99PP7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Trim33Q99PP7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim33Q99PP7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim33Q99PP7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trim33Q99PP7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim33Q99PP7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim33Q99PP7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim33Q99PP7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim33Q99PP7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim33Q99PP7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim33Q99PP7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim33Q99PP7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim33Q99PP7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim33Q99PP7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim33Q99PP7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim33Q99PP7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim33Q99PP7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim33Q99PP7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim33Q99PP7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim33Q99PP7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim33Q99PP7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim33Q99PP7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim33Q99PP7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim33Q99PP7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim33Q99PP7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim33Q99PP7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim33Q99PP7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trim33Q99PP7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim33Q99PP7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim33Q99PP7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim33Q99PP7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim33Q99PP7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim33Q99PP7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim33Q99PP7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim33Q99PP7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim33Q99PP7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim33Q99PP7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trim33Q99PP7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim33Q99PP7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim33Q99PP7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Trim33Q99PP7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim33Q99PP7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim33Q99PP7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim33Q99PP7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim33Q99PP7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim33Q99PP7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim33Q99PP7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim33Q99PP7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim33Q99PP7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim33Q99PP7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.03■□□□□ 0.96
Trim33Q99PP7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim33Q99PP7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim33Q99PP7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim33Q99PP7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim33Q99PP7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim33Q99PP7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.02■□□□□ 0.96
Trim33Q99PP7 Gm5921-201ENSMUST00000075898 882 ntBASIC21.02■□□□□ 0.96
Trim33Q99PP7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim33Q99PP7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim33Q99PP7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim33Q99PP7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim33Q99PP7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.01■□□□□ 0.95
Trim33Q99PP7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim33Q99PP7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim33Q99PP7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim33Q99PP7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim33Q99PP7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms