Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg4Q8VHY0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg4Q8VHY0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg4Q8VHY0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cspg4Q8VHY0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.75■□□□□ 0.59
Cspg4Q8VHY0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg4Q8VHY0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg4Q8VHY0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.75■□□□□ 0.59
Cspg4Q8VHY0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg4Q8VHY0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg4Q8VHY0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cspg4Q8VHY0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg4Q8VHY0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Cspg4Q8VHY0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg4Q8VHY0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg4Q8VHY0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg4Q8VHY0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg4Q8VHY0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cspg4Q8VHY0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg4Q8VHY0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg4Q8VHY0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg4Q8VHY0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.73■□□□□ 0.59
Cspg4Q8VHY0 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.73■□□□□ 0.59
Cspg4Q8VHY0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg4Q8VHY0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg4Q8VHY0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg4Q8VHY0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg4Q8VHY0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg4Q8VHY0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
Cspg4Q8VHY0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg4Q8VHY0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg4Q8VHY0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg4Q8VHY0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg4Q8VHY0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.72■□□□□ 0.59
Cspg4Q8VHY0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cspg4Q8VHY0 Gm7291-201ENSMUST00000199147 382 ntBASIC18.71■□□□□ 0.59
Cspg4Q8VHY0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.71■□□□□ 0.59
Cspg4Q8VHY0 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.71■□□□□ 0.59
Cspg4Q8VHY0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cspg4Q8VHY0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cspg4Q8VHY0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Cspg4Q8VHY0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg4Q8VHY0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg4Q8VHY0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg4Q8VHY0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg4Q8VHY0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg4Q8VHY0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg4Q8VHY0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cspg4Q8VHY0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cspg4Q8VHY0 Gm6139-201ENSMUST00000079261 882 ntBASIC18.69■□□□□ 0.58
Cspg4Q8VHY0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg4Q8VHY0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg4Q8VHY0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg4Q8VHY0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg4Q8VHY0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg4Q8VHY0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.67■□□□□ 0.58
Cspg4Q8VHY0 Gm26571-201ENSMUST00000181399 666 ntBASIC18.67■□□□□ 0.58
Cspg4Q8VHY0 Gm27405-201ENSMUST00000184201 112 ntBASIC18.67■□□□□ 0.58
Cspg4Q8VHY0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.67■□□□□ 0.58
Cspg4Q8VHY0 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.67■□□□□ 0.58
Cspg4Q8VHY0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cspg4Q8VHY0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg4Q8VHY0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg4Q8VHY0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg4Q8VHY0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg4Q8VHY0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cspg4Q8VHY0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg4Q8VHY0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.65■□□□□ 0.58
Cspg4Q8VHY0 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.65■□□□□ 0.58
Cspg4Q8VHY0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg4Q8VHY0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.65■□□□□ 0.58
Cspg4Q8VHY0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg4Q8VHY0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg4Q8VHY0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg4Q8VHY0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.64■□□□□ 0.57
Cspg4Q8VHY0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg4Q8VHY0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cspg4Q8VHY0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg4Q8VHY0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.63■□□□□ 0.57
Cspg4Q8VHY0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg4Q8VHY0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.63■□□□□ 0.57
Cspg4Q8VHY0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.63■□□□□ 0.57
Cspg4Q8VHY0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Cspg4Q8VHY0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.63■□□□□ 0.57
Cspg4Q8VHY0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg4Q8VHY0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg4Q8VHY0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.62■□□□□ 0.57
Cspg4Q8VHY0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.62■□□□□ 0.57
Cspg4Q8VHY0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms