Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab40bQ8VHP8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab40bQ8VHP8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rab40bQ8VHP8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rab40bQ8VHP8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Rab40bQ8VHP8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 Gm45364-201ENSMUST00000210883 159 ntBASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab40bQ8VHP8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40bQ8VHP8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40bQ8VHP8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40bQ8VHP8 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.28■□□□□ 0.68
Rab40bQ8VHP8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40bQ8VHP8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40bQ8VHP8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40bQ8VHP8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40bQ8VHP8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40bQ8VHP8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rab40bQ8VHP8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40bQ8VHP8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Rab40bQ8VHP8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab40bQ8VHP8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.26■□□□□ 0.67
Rab40bQ8VHP8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Rab40bQ8VHP8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab40bQ8VHP8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab40bQ8VHP8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab40bQ8VHP8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.25■□□□□ 0.67
Rab40bQ8VHP8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab40bQ8VHP8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab40bQ8VHP8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab40bQ8VHP8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40bQ8VHP8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40bQ8VHP8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40bQ8VHP8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40bQ8VHP8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40bQ8VHP8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40bQ8VHP8 Gm8503-201ENSMUST00000118131 455 ntBASIC19.24■□□□□ 0.67
Rab40bQ8VHP8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40bQ8VHP8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40bQ8VHP8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40bQ8VHP8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab40bQ8VHP8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rab40bQ8VHP8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.23■□□□□ 0.67
Rab40bQ8VHP8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab40bQ8VHP8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab40bQ8VHP8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab40bQ8VHP8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab40bQ8VHP8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab40bQ8VHP8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab40bQ8VHP8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab40bQ8VHP8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab40bQ8VHP8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab40bQ8VHP8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab40bQ8VHP8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab40bQ8VHP8 Notumos-201ENSMUST00000151998 2659 ntBASIC19.22■□□□□ 0.67
Rab40bQ8VHP8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rab40bQ8VHP8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Rab40bQ8VHP8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rab40bQ8VHP8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab40bQ8VHP8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab40bQ8VHP8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab40bQ8VHP8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab40bQ8VHP8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab40bQ8VHP8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.19■□□□□ 0.66
Rab40bQ8VHP8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.19■□□□□ 0.66
Rab40bQ8VHP8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab40bQ8VHP8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab40bQ8VHP8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab40bQ8VHP8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rab40bQ8VHP8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.18■□□□□ 0.66
Rab40bQ8VHP8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rab40bQ8VHP8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab40bQ8VHP8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rab40bQ8VHP8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rab40bQ8VHP8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Rab40bQ8VHP8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab40bQ8VHP8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab40bQ8VHP8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rab40bQ8VHP8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms