Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Top1mtQ8R4U6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Top1mtQ8R4U6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Top1mtQ8R4U6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Top1mtQ8R4U6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Top1mtQ8R4U6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.72■■□□□ 1.71
Top1mtQ8R4U6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Top1mtQ8R4U6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Top1mtQ8R4U6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Top1mtQ8R4U6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.71■■□□□ 1.71
Top1mtQ8R4U6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Top1mtQ8R4U6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.71■■□□□ 1.71
Top1mtQ8R4U6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.71■■□□□ 1.71
Top1mtQ8R4U6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.71■■□□□ 1.71
Top1mtQ8R4U6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Top1mtQ8R4U6 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.71■■□□□ 1.71
Top1mtQ8R4U6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.71■■□□□ 1.71
Top1mtQ8R4U6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Top1mtQ8R4U6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Top1mtQ8R4U6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Top1mtQ8R4U6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Top1mtQ8R4U6 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.7■■□□□ 1.7
Top1mtQ8R4U6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Top1mtQ8R4U6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Top1mtQ8R4U6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Top1mtQ8R4U6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Top1mtQ8R4U6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Top1mtQ8R4U6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Top1mtQ8R4U6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Top1mtQ8R4U6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Top1mtQ8R4U6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.69■■□□□ 1.7
Top1mtQ8R4U6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25.69■■□□□ 1.7
Top1mtQ8R4U6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Top1mtQ8R4U6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
Top1mtQ8R4U6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Top1mtQ8R4U6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Top1mtQ8R4U6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Top1mtQ8R4U6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
Top1mtQ8R4U6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Top1mtQ8R4U6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC25.68■■□□□ 1.7
Top1mtQ8R4U6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Top1mtQ8R4U6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Top1mtQ8R4U6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Top1mtQ8R4U6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Top1mtQ8R4U6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Top1mtQ8R4U6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
Top1mtQ8R4U6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Top1mtQ8R4U6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Top1mtQ8R4U6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
Top1mtQ8R4U6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Top1mtQ8R4U6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Top1mtQ8R4U6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Top1mtQ8R4U6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Top1mtQ8R4U6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
Top1mtQ8R4U6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Top1mtQ8R4U6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Top1mtQ8R4U6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Top1mtQ8R4U6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Top1mtQ8R4U6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Top1mtQ8R4U6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Top1mtQ8R4U6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Top1mtQ8R4U6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.64■■□□□ 1.69
Top1mtQ8R4U6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Top1mtQ8R4U6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Top1mtQ8R4U6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.63■■□□□ 1.69
Top1mtQ8R4U6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Top1mtQ8R4U6 Dmtn-209ENSMUST00000228295 2572 ntBASIC25.63■■□□□ 1.69
Top1mtQ8R4U6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Top1mtQ8R4U6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Top1mtQ8R4U6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Top1mtQ8R4U6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.63■■□□□ 1.69
Top1mtQ8R4U6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Top1mtQ8R4U6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Top1mtQ8R4U6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Top1mtQ8R4U6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Top1mtQ8R4U6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Top1mtQ8R4U6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Top1mtQ8R4U6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Top1mtQ8R4U6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Top1mtQ8R4U6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Top1mtQ8R4U6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Top1mtQ8R4U6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Top1mtQ8R4U6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC25.6■■□□□ 1.69
Top1mtQ8R4U6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.6■■□□□ 1.69
Top1mtQ8R4U6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Top1mtQ8R4U6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Top1mtQ8R4U6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Top1mtQ8R4U6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Top1mtQ8R4U6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Top1mtQ8R4U6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Top1mtQ8R4U6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Top1mtQ8R4U6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Top1mtQ8R4U6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.68
Top1mtQ8R4U6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC25.57■■□□□ 1.68
Top1mtQ8R4U6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Top1mtQ8R4U6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Top1mtQ8R4U6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Top1mtQ8R4U6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Top1mtQ8R4U6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Top1mtQ8R4U6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC25.57■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms