Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
H2afjQ8R1M2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
H2afjQ8R1M2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
H2afjQ8R1M2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afjQ8R1M2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
H2afjQ8R1M2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.82■□□□□ 0.76
H2afjQ8R1M2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afjQ8R1M2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afjQ8R1M2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afjQ8R1M2 Scarna2-201ENSMUST00000157560 414 ntBASIC19.82■□□□□ 0.76
H2afjQ8R1M2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afjQ8R1M2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afjQ8R1M2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H2afjQ8R1M2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
H2afjQ8R1M2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
H2afjQ8R1M2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
H2afjQ8R1M2 Gm44428-201ENSMUST00000204474 874 ntBASIC19.81■□□□□ 0.76
H2afjQ8R1M2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H2afjQ8R1M2 Gm9806-201ENSMUST00000051080 552 ntBASIC19.81■□□□□ 0.76
H2afjQ8R1M2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
H2afjQ8R1M2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
H2afjQ8R1M2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H2afjQ8R1M2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Gm16437-201ENSMUST00000025669 507 ntBASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afjQ8R1M2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afjQ8R1M2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
H2afjQ8R1M2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afjQ8R1M2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afjQ8R1M2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afjQ8R1M2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afjQ8R1M2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afjQ8R1M2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
H2afjQ8R1M2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afjQ8R1M2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afjQ8R1M2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
H2afjQ8R1M2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
H2afjQ8R1M2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afjQ8R1M2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afjQ8R1M2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afjQ8R1M2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afjQ8R1M2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H2afjQ8R1M2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
H2afjQ8R1M2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
H2afjQ8R1M2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
H2afjQ8R1M2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
H2afjQ8R1M2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
H2afjQ8R1M2 Gm11687-201ENSMUST00000118911 886 ntBASIC19.77■□□□□ 0.76
H2afjQ8R1M2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
H2afjQ8R1M2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afjQ8R1M2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.76■□□□□ 0.75
H2afjQ8R1M2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afjQ8R1M2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
H2afjQ8R1M2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afjQ8R1M2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afjQ8R1M2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afjQ8R1M2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H2afjQ8R1M2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H2afjQ8R1M2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.74■□□□□ 0.75
H2afjQ8R1M2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
H2afjQ8R1M2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H2afjQ8R1M2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H2afjQ8R1M2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
H2afjQ8R1M2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
H2afjQ8R1M2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
H2afjQ8R1M2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.73■□□□□ 0.75
H2afjQ8R1M2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.73■□□□□ 0.75
H2afjQ8R1M2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.73■□□□□ 0.75
H2afjQ8R1M2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.73■□□□□ 0.75
H2afjQ8R1M2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afjQ8R1M2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afjQ8R1M2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afjQ8R1M2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
H2afjQ8R1M2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afjQ8R1M2 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.72■□□□□ 0.75
H2afjQ8R1M2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
H2afjQ8R1M2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afjQ8R1M2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afjQ8R1M2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afjQ8R1M2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afjQ8R1M2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afjQ8R1M2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
H2afjQ8R1M2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afjQ8R1M2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
H2afjQ8R1M2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afjQ8R1M2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
H2afjQ8R1M2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.71■□□□□ 0.75
H2afjQ8R1M2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afjQ8R1M2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
H2afjQ8R1M2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afjQ8R1M2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms