Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hist3h2bbQ8CGP0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hist3h2bbQ8CGP0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hist3h2bbQ8CGP0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hist3h2bbQ8CGP0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hist3h2bbQ8CGP0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.39■□□□□ 0.21
Hist3h2bbQ8CGP0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Hist3h2bbQ8CGP0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist3h2bbQ8CGP0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist3h2bbQ8CGP0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hist3h2bbQ8CGP0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist3h2bbQ8CGP0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.38■□□□□ 0.21
Hist3h2bbQ8CGP0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.38■□□□□ 0.21
Hist3h2bbQ8CGP0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hist3h2bbQ8CGP0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist3h2bbQ8CGP0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hist3h2bbQ8CGP0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist3h2bbQ8CGP0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist3h2bbQ8CGP0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hist3h2bbQ8CGP0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist3h2bbQ8CGP0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hist3h2bbQ8CGP0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist3h2bbQ8CGP0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Hist3h2bbQ8CGP0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist3h2bbQ8CGP0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist3h2bbQ8CGP0 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.36■□□□□ 0.21
Hist3h2bbQ8CGP0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hist3h2bbQ8CGP0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hist3h2bbQ8CGP0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist3h2bbQ8CGP0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.36■□□□□ 0.21
Hist3h2bbQ8CGP0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist3h2bbQ8CGP0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist3h2bbQ8CGP0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist3h2bbQ8CGP0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist3h2bbQ8CGP0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist3h2bbQ8CGP0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist3h2bbQ8CGP0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Hist3h2bbQ8CGP0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist3h2bbQ8CGP0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist3h2bbQ8CGP0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist3h2bbQ8CGP0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist3h2bbQ8CGP0 Gm25238-201ENSMUST00000174914 89 ntBASIC16.34■□□□□ 0.21
Hist3h2bbQ8CGP0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.34■□□□□ 0.21
Hist3h2bbQ8CGP0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist3h2bbQ8CGP0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist3h2bbQ8CGP0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hist3h2bbQ8CGP0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hist3h2bbQ8CGP0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist3h2bbQ8CGP0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hist3h2bbQ8CGP0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist3h2bbQ8CGP0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.32■□□□□ 0.2
Hist3h2bbQ8CGP0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist3h2bbQ8CGP0 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.32■□□□□ 0.2
Hist3h2bbQ8CGP0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist3h2bbQ8CGP0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hist3h2bbQ8CGP0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist3h2bbQ8CGP0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist3h2bbQ8CGP0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hist3h2bbQ8CGP0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hist3h2bbQ8CGP0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.31■□□□□ 0.2
Hist3h2bbQ8CGP0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist3h2bbQ8CGP0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.31■□□□□ 0.2
Hist3h2bbQ8CGP0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hist3h2bbQ8CGP0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist3h2bbQ8CGP0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist3h2bbQ8CGP0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hist3h2bbQ8CGP0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist3h2bbQ8CGP0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist3h2bbQ8CGP0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist3h2bbQ8CGP0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hist3h2bbQ8CGP0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist3h2bbQ8CGP0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist3h2bbQ8CGP0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist3h2bbQ8CGP0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist3h2bbQ8CGP0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist3h2bbQ8CGP0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist3h2bbQ8CGP0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist3h2bbQ8CGP0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist3h2bbQ8CGP0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist3h2bbQ8CGP0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist3h2bbQ8CGP0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.28■□□□□ 0.2
Hist3h2bbQ8CGP0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist3h2bbQ8CGP0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist3h2bbQ8CGP0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hist3h2bbQ8CGP0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist3h2bbQ8CGP0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist3h2bbQ8CGP0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hist3h2bbQ8CGP0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms