Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.61■□□□□ 0.89
SynpoQ8CC35 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.61■□□□□ 0.89
SynpoQ8CC35 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SynpoQ8CC35 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SynpoQ8CC35 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SynpoQ8CC35 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SynpoQ8CC35 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SynpoQ8CC35 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SynpoQ8CC35 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SynpoQ8CC35 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SynpoQ8CC35 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SynpoQ8CC35 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SynpoQ8CC35 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SynpoQ8CC35 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Gm43566-201ENSMUST00000196851 808 ntBASIC20.59■□□□□ 0.89
SynpoQ8CC35 Gm45444-201ENSMUST00000211394 898 ntBASIC20.59■□□□□ 0.89
SynpoQ8CC35 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SynpoQ8CC35 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
SynpoQ8CC35 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SynpoQ8CC35 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SynpoQ8CC35 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SynpoQ8CC35 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SynpoQ8CC35 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SynpoQ8CC35 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SynpoQ8CC35 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SynpoQ8CC35 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SynpoQ8CC35 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SynpoQ8CC35 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SynpoQ8CC35 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.56■□□□□ 0.88
SynpoQ8CC35 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SynpoQ8CC35 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SynpoQ8CC35 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.55■□□□□ 0.88
SynpoQ8CC35 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SynpoQ8CC35 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SynpoQ8CC35 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.55■□□□□ 0.88
SynpoQ8CC35 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SynpoQ8CC35 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SynpoQ8CC35 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SynpoQ8CC35 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SynpoQ8CC35 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SynpoQ8CC35 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SynpoQ8CC35 Gm13238-201ENSMUST00000117655 780 ntBASIC20.53■□□□□ 0.88
SynpoQ8CC35 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.53■□□□□ 0.88
SynpoQ8CC35 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.53■□□□□ 0.88
SynpoQ8CC35 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.53■□□□□ 0.88
SynpoQ8CC35 Gm15820-201ENSMUST00000201566 728 ntBASIC20.53■□□□□ 0.88
SynpoQ8CC35 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.53■□□□□ 0.88
SynpoQ8CC35 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.53■□□□□ 0.88
SynpoQ8CC35 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SynpoQ8CC35 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SynpoQ8CC35 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SynpoQ8CC35 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SynpoQ8CC35 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SynpoQ8CC35 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SynpoQ8CC35 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
SynpoQ8CC35 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
SynpoQ8CC35 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SynpoQ8CC35 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.51■□□□□ 0.87
SynpoQ8CC35 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SynpoQ8CC35 Gm22567-201ENSMUST00000175542 342 ntBASIC20.51■□□□□ 0.87
SynpoQ8CC35 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SynpoQ8CC35 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SynpoQ8CC35 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SynpoQ8CC35 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SynpoQ8CC35 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SynpoQ8CC35 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SynpoQ8CC35 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SynpoQ8CC35 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SynpoQ8CC35 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
SynpoQ8CC35 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SynpoQ8CC35 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SynpoQ8CC35 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SynpoQ8CC35 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SynpoQ8CC35 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SynpoQ8CC35 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SynpoQ8CC35 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SynpoQ8CC35 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.49■□□□□ 0.87
SynpoQ8CC35 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
SynpoQ8CC35 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.49■□□□□ 0.87
SynpoQ8CC35 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SynpoQ8CC35 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SynpoQ8CC35 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.48■□□□□ 0.87
SynpoQ8CC35 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SynpoQ8CC35 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SynpoQ8CC35 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SynpoQ8CC35 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SynpoQ8CC35 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SynpoQ8CC35 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SynpoQ8CC35 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SynpoQ8CC35 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms