Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gm11687-201ENSMUST00000118911 886 ntBASIC17.92■□□□□ 0.46
Smim4Q8C1Q6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smim4Q8C1Q6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smim4Q8C1Q6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smim4Q8C1Q6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smim4Q8C1Q6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smim4Q8C1Q6 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.91■□□□□ 0.46
Smim4Q8C1Q6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Smim4Q8C1Q6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smim4Q8C1Q6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smim4Q8C1Q6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smim4Q8C1Q6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smim4Q8C1Q6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.91■□□□□ 0.46
Smim4Q8C1Q6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smim4Q8C1Q6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smim4Q8C1Q6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smim4Q8C1Q6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.9■□□□□ 0.46
Smim4Q8C1Q6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smim4Q8C1Q6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smim4Q8C1Q6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smim4Q8C1Q6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smim4Q8C1Q6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smim4Q8C1Q6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.9■□□□□ 0.46
Smim4Q8C1Q6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Smim4Q8C1Q6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smim4Q8C1Q6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Smim4Q8C1Q6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smim4Q8C1Q6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Smim4Q8C1Q6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smim4Q8C1Q6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smim4Q8C1Q6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.88■□□□□ 0.45
Smim4Q8C1Q6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Smim4Q8C1Q6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smim4Q8C1Q6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smim4Q8C1Q6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smim4Q8C1Q6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.87■□□□□ 0.45
Smim4Q8C1Q6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Smim4Q8C1Q6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smim4Q8C1Q6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smim4Q8C1Q6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.87■□□□□ 0.45
Smim4Q8C1Q6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smim4Q8C1Q6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Smim4Q8C1Q6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
Smim4Q8C1Q6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim4Q8C1Q6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Smim4Q8C1Q6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim4Q8C1Q6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim4Q8C1Q6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Smim4Q8C1Q6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.86■□□□□ 0.45
Smim4Q8C1Q6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.86■□□□□ 0.45
Smim4Q8C1Q6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Smim4Q8C1Q6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim4Q8C1Q6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.85■□□□□ 0.45
Smim4Q8C1Q6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smim4Q8C1Q6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smim4Q8C1Q6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smim4Q8C1Q6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smim4Q8C1Q6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.85■□□□□ 0.45
Smim4Q8C1Q6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smim4Q8C1Q6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smim4Q8C1Q6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim4Q8C1Q6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim4Q8C1Q6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smim4Q8C1Q6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim4Q8C1Q6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim4Q8C1Q6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim4Q8C1Q6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim4Q8C1Q6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smim4Q8C1Q6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smim4Q8C1Q6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim4Q8C1Q6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smim4Q8C1Q6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Smim4Q8C1Q6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smim4Q8C1Q6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.83■□□□□ 0.44
Smim4Q8C1Q6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smim4Q8C1Q6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smim4Q8C1Q6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smim4Q8C1Q6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smim4Q8C1Q6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms