Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdhr3Q8BL00 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cdhr3Q8BL00 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Cdhr3Q8BL00 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdhr3Q8BL00 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.7■□□□□ 0.58
Cdhr3Q8BL00 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdhr3Q8BL00 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdhr3Q8BL00 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdhr3Q8BL00 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdhr3Q8BL00 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cdhr3Q8BL00 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Gm6311-201ENSMUST00000073790 878 ntBASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.69■□□□□ 0.58
Cdhr3Q8BL00 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cdhr3Q8BL00 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.68■□□□□ 0.58
Cdhr3Q8BL00 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdhr3Q8BL00 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdhr3Q8BL00 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.68■□□□□ 0.58
Cdhr3Q8BL00 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.68■□□□□ 0.58
Cdhr3Q8BL00 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdhr3Q8BL00 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdhr3Q8BL00 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdhr3Q8BL00 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdhr3Q8BL00 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdhr3Q8BL00 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdhr3Q8BL00 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cdhr3Q8BL00 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdhr3Q8BL00 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdhr3Q8BL00 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdhr3Q8BL00 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdhr3Q8BL00 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cdhr3Q8BL00 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdhr3Q8BL00 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.66■□□□□ 0.58
Cdhr3Q8BL00 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdhr3Q8BL00 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdhr3Q8BL00 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdhr3Q8BL00 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cdhr3Q8BL00 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Cdhr3Q8BL00 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdhr3Q8BL00 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Cdhr3Q8BL00 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdhr3Q8BL00 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdhr3Q8BL00 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdhr3Q8BL00 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Cdhr3Q8BL00 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdhr3Q8BL00 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdhr3Q8BL00 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdhr3Q8BL00 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.64■□□□□ 0.57
Cdhr3Q8BL00 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdhr3Q8BL00 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cdhr3Q8BL00 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdhr3Q8BL00 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr3Q8BL00 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr3Q8BL00 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
Cdhr3Q8BL00 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.63■□□□□ 0.57
Cdhr3Q8BL00 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr3Q8BL00 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr3Q8BL00 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr3Q8BL00 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr3Q8BL00 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr3Q8BL00 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr3Q8BL00 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Cdhr3Q8BL00 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr3Q8BL00 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.62■□□□□ 0.57
Cdhr3Q8BL00 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr3Q8BL00 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr3Q8BL00 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.62■□□□□ 0.57
Cdhr3Q8BL00 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr3Q8BL00 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cdhr3Q8BL00 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr3Q8BL00 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr3Q8BL00 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr3Q8BL00 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr3Q8BL00 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr3Q8BL00 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr3Q8BL00 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr3Q8BL00 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr3Q8BL00 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr3Q8BL00 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cdhr3Q8BL00 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cdhr3Q8BL00 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdhr3Q8BL00 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cdhr3Q8BL00 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.6■□□□□ 0.57
Cdhr3Q8BL00 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Cdhr3Q8BL00 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms