Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smndc1Q8BGT7 Gm4799-201ENSMUST00000095396 657 ntBASIC20.59■□□□□ 0.89
Smndc1Q8BGT7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smndc1Q8BGT7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smndc1Q8BGT7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smndc1Q8BGT7 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.59■□□□□ 0.89
Smndc1Q8BGT7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smndc1Q8BGT7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Smndc1Q8BGT7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Smndc1Q8BGT7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smndc1Q8BGT7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smndc1Q8BGT7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Smndc1Q8BGT7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Smndc1Q8BGT7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smndc1Q8BGT7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Smndc1Q8BGT7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smndc1Q8BGT7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smndc1Q8BGT7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smndc1Q8BGT7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smndc1Q8BGT7 Gm11175-201ENSMUST00000116172 543 ntBASIC20.57■□□□□ 0.88
Smndc1Q8BGT7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.57■□□□□ 0.88
Smndc1Q8BGT7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smndc1Q8BGT7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smndc1Q8BGT7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smndc1Q8BGT7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smndc1Q8BGT7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smndc1Q8BGT7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smndc1Q8BGT7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smndc1Q8BGT7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smndc1Q8BGT7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smndc1Q8BGT7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smndc1Q8BGT7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Smndc1Q8BGT7 Mir6538-201ENSMUST00000183713 110 ntBASIC20.55■□□□□ 0.88
Smndc1Q8BGT7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Smndc1Q8BGT7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smndc1Q8BGT7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smndc1Q8BGT7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smndc1Q8BGT7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smndc1Q8BGT7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smndc1Q8BGT7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.54■□□□□ 0.88
Smndc1Q8BGT7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smndc1Q8BGT7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smndc1Q8BGT7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smndc1Q8BGT7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.54■□□□□ 0.88
Smndc1Q8BGT7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.53■□□□□ 0.88
Smndc1Q8BGT7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Smndc1Q8BGT7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smndc1Q8BGT7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smndc1Q8BGT7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smndc1Q8BGT7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smndc1Q8BGT7 Gm37136-201ENSMUST00000194368 194 ntBASIC20.52■□□□□ 0.88
Smndc1Q8BGT7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smndc1Q8BGT7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Smndc1Q8BGT7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smndc1Q8BGT7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smndc1Q8BGT7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smndc1Q8BGT7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smndc1Q8BGT7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smndc1Q8BGT7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smndc1Q8BGT7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smndc1Q8BGT7 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.5■□□□□ 0.87
Smndc1Q8BGT7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.5■□□□□ 0.87
Smndc1Q8BGT7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smndc1Q8BGT7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smndc1Q8BGT7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Smndc1Q8BGT7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smndc1Q8BGT7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.49■□□□□ 0.87
Smndc1Q8BGT7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smndc1Q8BGT7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smndc1Q8BGT7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smndc1Q8BGT7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.49■□□□□ 0.87
Smndc1Q8BGT7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smndc1Q8BGT7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smndc1Q8BGT7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smndc1Q8BGT7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smndc1Q8BGT7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smndc1Q8BGT7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smndc1Q8BGT7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smndc1Q8BGT7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smndc1Q8BGT7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.47■□□□□ 0.87
Smndc1Q8BGT7 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.47■□□□□ 0.87
Smndc1Q8BGT7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smndc1Q8BGT7 Mir3960-201ENSMUST00000198213 73 ntBASIC20.47■□□□□ 0.87
Smndc1Q8BGT7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smndc1Q8BGT7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Smndc1Q8BGT7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smndc1Q8BGT7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smndc1Q8BGT7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smndc1Q8BGT7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Smndc1Q8BGT7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.46■□□□□ 0.87
Smndc1Q8BGT7 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.46■□□□□ 0.87
Smndc1Q8BGT7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.46■□□□□ 0.87
Smndc1Q8BGT7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smndc1Q8BGT7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smndc1Q8BGT7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Smndc1Q8BGT7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smndc1Q8BGT7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smndc1Q8BGT7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Smndc1Q8BGT7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Smndc1Q8BGT7 Scarna2-201ENSMUST00000157560 414 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms