Protein–RNA interactions for Protein: Q80ZV0

Rnaseh2b, Ribonuclease H2 subunit B, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2bQ80ZV0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnaseh2bQ80ZV0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnaseh2bQ80ZV0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnaseh2bQ80ZV0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnaseh2bQ80ZV0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.47■■□□□ 1.19
Rnaseh2bQ80ZV0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Rnaseh2bQ80ZV0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.47■■□□□ 1.19
Rnaseh2bQ80ZV0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnaseh2bQ80ZV0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnaseh2bQ80ZV0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnaseh2bQ80ZV0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Rnaseh2bQ80ZV0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rnaseh2bQ80ZV0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Rnaseh2bQ80ZV0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnaseh2bQ80ZV0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Rnaseh2bQ80ZV0 Gm6311-201ENSMUST00000073790 878 ntBASIC22.46■■□□□ 1.19
Rnaseh2bQ80ZV0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rnaseh2bQ80ZV0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
Rnaseh2bQ80ZV0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnaseh2bQ80ZV0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnaseh2bQ80ZV0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnaseh2bQ80ZV0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Rnaseh2bQ80ZV0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnaseh2bQ80ZV0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnaseh2bQ80ZV0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnaseh2bQ80ZV0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.45■■□□□ 1.18
Rnaseh2bQ80ZV0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
Rnaseh2bQ80ZV0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnaseh2bQ80ZV0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnaseh2bQ80ZV0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnaseh2bQ80ZV0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnaseh2bQ80ZV0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.44■■□□□ 1.18
Rnaseh2bQ80ZV0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnaseh2bQ80ZV0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.43■■□□□ 1.18
Rnaseh2bQ80ZV0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnaseh2bQ80ZV0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rnaseh2bQ80ZV0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnaseh2bQ80ZV0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rnaseh2bQ80ZV0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.42■■□□□ 1.18
Rnaseh2bQ80ZV0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.42■■□□□ 1.18
Rnaseh2bQ80ZV0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnaseh2bQ80ZV0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnaseh2bQ80ZV0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnaseh2bQ80ZV0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnaseh2bQ80ZV0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rnaseh2bQ80ZV0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Rnaseh2bQ80ZV0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnaseh2bQ80ZV0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnaseh2bQ80ZV0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnaseh2bQ80ZV0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rnaseh2bQ80ZV0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Rnaseh2bQ80ZV0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Rnaseh2bQ80ZV0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnaseh2bQ80ZV0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnaseh2bQ80ZV0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rnaseh2bQ80ZV0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnaseh2bQ80ZV0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rnaseh2bQ80ZV0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rnaseh2bQ80ZV0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rnaseh2bQ80ZV0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rnaseh2bQ80ZV0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rnaseh2bQ80ZV0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Rnaseh2bQ80ZV0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnaseh2bQ80ZV0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnaseh2bQ80ZV0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rnaseh2bQ80ZV0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.36■■□□□ 1.17
Rnaseh2bQ80ZV0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Rnaseh2bQ80ZV0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnaseh2bQ80ZV0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.36■■□□□ 1.17
Rnaseh2bQ80ZV0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnaseh2bQ80ZV0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.36■■□□□ 1.17
Rnaseh2bQ80ZV0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Rnaseh2bQ80ZV0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rnaseh2bQ80ZV0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnaseh2bQ80ZV0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnaseh2bQ80ZV0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rnaseh2bQ80ZV0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.35■■□□□ 1.17
Rnaseh2bQ80ZV0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.35■■□□□ 1.17
Rnaseh2bQ80ZV0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rnaseh2bQ80ZV0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnaseh2bQ80ZV0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnaseh2bQ80ZV0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnaseh2bQ80ZV0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.34■■□□□ 1.17
Rnaseh2bQ80ZV0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnaseh2bQ80ZV0 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.34■■□□□ 1.17
Rnaseh2bQ80ZV0 Gm9806-201ENSMUST00000051080 552 ntBASIC22.34■■□□□ 1.17
Rnaseh2bQ80ZV0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnaseh2bQ80ZV0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnaseh2bQ80ZV0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnaseh2bQ80ZV0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rnaseh2bQ80ZV0 Scarna2-201ENSMUST00000157560 414 ntBASIC22.33■■□□□ 1.17
Rnaseh2bQ80ZV0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rnaseh2bQ80ZV0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rnaseh2bQ80ZV0 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.33■■□□□ 1.16
Rnaseh2bQ80ZV0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnaseh2bQ80ZV0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnaseh2bQ80ZV0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnaseh2bQ80ZV0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnaseh2bQ80ZV0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rnaseh2bQ80ZV0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms