Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vrk1Q80X41 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Vrk1Q80X41 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.49■□□□□ 0.87
Vrk1Q80X41 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.49■□□□□ 0.87
Vrk1Q80X41 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Vrk1Q80X41 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vrk1Q80X41 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vrk1Q80X41 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vrk1Q80X41 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vrk1Q80X41 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vrk1Q80X41 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vrk1Q80X41 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vrk1Q80X41 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vrk1Q80X41 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.47■□□□□ 0.87
Vrk1Q80X41 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.47■□□□□ 0.87
Vrk1Q80X41 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.47■□□□□ 0.87
Vrk1Q80X41 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.47■□□□□ 0.87
Vrk1Q80X41 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk1Q80X41 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk1Q80X41 Gm22238-201ENSMUST00000175222 88 ntBASIC20.46■□□□□ 0.87
Vrk1Q80X41 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk1Q80X41 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.46■□□□□ 0.87
Vrk1Q80X41 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk1Q80X41 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk1Q80X41 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk1Q80X41 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk1Q80X41 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk1Q80X41 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vrk1Q80X41 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vrk1Q80X41 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Vrk1Q80X41 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vrk1Q80X41 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vrk1Q80X41 Gm13241-201ENSMUST00000094493 780 ntBASIC20.45■□□□□ 0.86
Vrk1Q80X41 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Vrk1Q80X41 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.44■□□□□ 0.86
Vrk1Q80X41 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vrk1Q80X41 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vrk1Q80X41 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vrk1Q80X41 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vrk1Q80X41 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vrk1Q80X41 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vrk1Q80X41 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vrk1Q80X41 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vrk1Q80X41 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vrk1Q80X41 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.43■□□□□ 0.86
Vrk1Q80X41 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Vrk1Q80X41 Gm10399-202ENSMUST00000202768 748 ntBASIC20.43■□□□□ 0.86
Vrk1Q80X41 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Vrk1Q80X41 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vrk1Q80X41 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vrk1Q80X41 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Vrk1Q80X41 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.42■□□□□ 0.86
Vrk1Q80X41 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vrk1Q80X41 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vrk1Q80X41 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vrk1Q80X41 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vrk1Q80X41 Gm9847-201ENSMUST00000052528 599 ntBASIC20.42■□□□□ 0.86
Vrk1Q80X41 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vrk1Q80X41 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.41■□□□□ 0.86
Vrk1Q80X41 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Vrk1Q80X41 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vrk1Q80X41 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.41■□□□□ 0.86
Vrk1Q80X41 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.41■□□□□ 0.86
Vrk1Q80X41 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Vrk1Q80X41 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vrk1Q80X41 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Vrk1Q80X41 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.41■□□□□ 0.86
Vrk1Q80X41 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vrk1Q80X41 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vrk1Q80X41 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vrk1Q80X41 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vrk1Q80X41 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vrk1Q80X41 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vrk1Q80X41 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vrk1Q80X41 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vrk1Q80X41 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vrk1Q80X41 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.39■□□□□ 0.85
Vrk1Q80X41 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.39■□□□□ 0.85
Vrk1Q80X41 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vrk1Q80X41 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vrk1Q80X41 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vrk1Q80X41 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vrk1Q80X41 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.38■□□□□ 0.85
Vrk1Q80X41 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vrk1Q80X41 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vrk1Q80X41 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Vrk1Q80X41 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Vrk1Q80X41 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.38■□□□□ 0.85
Vrk1Q80X41 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk1Q80X41 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk1Q80X41 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk1Q80X41 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk1Q80X41 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk1Q80X41 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk1Q80X41 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.37■□□□□ 0.85
Vrk1Q80X41 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk1Q80X41 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk1Q80X41 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk1Q80X41 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk1Q80X41 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms