Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.77■□□□□ 0.76
Pif1Q80SX8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pif1Q80SX8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pif1Q80SX8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pif1Q80SX8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pif1Q80SX8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pif1Q80SX8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pif1Q80SX8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pif1Q80SX8 Gm22238-201ENSMUST00000175222 88 ntBASIC19.76■□□□□ 0.75
Pif1Q80SX8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pif1Q80SX8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pif1Q80SX8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pif1Q80SX8 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.75■□□□□ 0.75
Pif1Q80SX8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.75■□□□□ 0.75
Pif1Q80SX8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pif1Q80SX8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pif1Q80SX8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pif1Q80SX8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.74■□□□□ 0.75
Pif1Q80SX8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pif1Q80SX8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pif1Q80SX8 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.74■□□□□ 0.75
Pif1Q80SX8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pif1Q80SX8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.74■□□□□ 0.75
Pif1Q80SX8 Gm9847-201ENSMUST00000052528 599 ntBASIC19.74■□□□□ 0.75
Pif1Q80SX8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Pif1Q80SX8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pif1Q80SX8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pif1Q80SX8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pif1Q80SX8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pif1Q80SX8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pif1Q80SX8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.73■□□□□ 0.75
Pif1Q80SX8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pif1Q80SX8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pif1Q80SX8 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.73■□□□□ 0.75
Pif1Q80SX8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pif1Q80SX8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pif1Q80SX8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pif1Q80SX8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pif1Q80SX8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pif1Q80SX8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pif1Q80SX8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pif1Q80SX8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.72■□□□□ 0.75
Pif1Q80SX8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pif1Q80SX8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pif1Q80SX8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pif1Q80SX8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pif1Q80SX8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pif1Q80SX8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pif1Q80SX8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pif1Q80SX8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.71■□□□□ 0.75
Pif1Q80SX8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pif1Q80SX8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pif1Q80SX8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pif1Q80SX8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.71■□□□□ 0.75
Pif1Q80SX8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.71■□□□□ 0.75
Pif1Q80SX8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pif1Q80SX8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.71■□□□□ 0.75
Pif1Q80SX8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.71■□□□□ 0.75
Pif1Q80SX8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pif1Q80SX8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pif1Q80SX8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pif1Q80SX8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.7■□□□□ 0.74
Pif1Q80SX8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pif1Q80SX8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pif1Q80SX8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pif1Q80SX8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.69■□□□□ 0.74
Pif1Q80SX8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pif1Q80SX8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pif1Q80SX8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pif1Q80SX8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.68■□□□□ 0.74
Pif1Q80SX8 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.68■□□□□ 0.74
Pif1Q80SX8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pif1Q80SX8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pif1Q80SX8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pif1Q80SX8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pif1Q80SX8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pif1Q80SX8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pif1Q80SX8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pif1Q80SX8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Pif1Q80SX8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.67■□□□□ 0.74
Pif1Q80SX8 Gm10399-202ENSMUST00000202768 748 ntBASIC19.67■□□□□ 0.74
Pif1Q80SX8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pif1Q80SX8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pif1Q80SX8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pif1Q80SX8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pif1Q80SX8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pif1Q80SX8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pif1Q80SX8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pif1Q80SX8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pif1Q80SX8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pif1Q80SX8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pif1Q80SX8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pif1Q80SX8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pif1Q80SX8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pif1Q80SX8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.65■□□□□ 0.74
Pif1Q80SX8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Pif1Q80SX8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.65■□□□□ 0.74
Pif1Q80SX8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pif1Q80SX8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pif1Q80SX8 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms