Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
R3hdm4Q4VBF2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.32■■□□□ 1.32
R3hdm4Q4VBF2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
R3hdm4Q4VBF2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
R3hdm4Q4VBF2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
R3hdm4Q4VBF2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.32■■□□□ 1.32
R3hdm4Q4VBF2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
R3hdm4Q4VBF2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
R3hdm4Q4VBF2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
R3hdm4Q4VBF2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
R3hdm4Q4VBF2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
R3hdm4Q4VBF2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.31■■□□□ 1.32
R3hdm4Q4VBF2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
R3hdm4Q4VBF2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
R3hdm4Q4VBF2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
R3hdm4Q4VBF2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
R3hdm4Q4VBF2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
R3hdm4Q4VBF2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
R3hdm4Q4VBF2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.3■■□□□ 1.32
R3hdm4Q4VBF2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
R3hdm4Q4VBF2 Gm43566-201ENSMUST00000196851 808 ntBASIC23.29■■□□□ 1.32
R3hdm4Q4VBF2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
R3hdm4Q4VBF2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
R3hdm4Q4VBF2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
R3hdm4Q4VBF2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
R3hdm4Q4VBF2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
R3hdm4Q4VBF2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.28■■□□□ 1.32
R3hdm4Q4VBF2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
R3hdm4Q4VBF2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
R3hdm4Q4VBF2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
R3hdm4Q4VBF2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
R3hdm4Q4VBF2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
R3hdm4Q4VBF2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
R3hdm4Q4VBF2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
R3hdm4Q4VBF2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
R3hdm4Q4VBF2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.27■■□□□ 1.31
R3hdm4Q4VBF2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
R3hdm4Q4VBF2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.26■■□□□ 1.31
R3hdm4Q4VBF2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
R3hdm4Q4VBF2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
R3hdm4Q4VBF2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
R3hdm4Q4VBF2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
R3hdm4Q4VBF2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
R3hdm4Q4VBF2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
R3hdm4Q4VBF2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
R3hdm4Q4VBF2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.25■■□□□ 1.31
R3hdm4Q4VBF2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.24■■□□□ 1.31
R3hdm4Q4VBF2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.24■■□□□ 1.31
R3hdm4Q4VBF2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
R3hdm4Q4VBF2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
R3hdm4Q4VBF2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
R3hdm4Q4VBF2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
R3hdm4Q4VBF2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
R3hdm4Q4VBF2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
R3hdm4Q4VBF2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.23■■□□□ 1.31
R3hdm4Q4VBF2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
R3hdm4Q4VBF2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
R3hdm4Q4VBF2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
R3hdm4Q4VBF2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
R3hdm4Q4VBF2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.22■■□□□ 1.31
R3hdm4Q4VBF2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
R3hdm4Q4VBF2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
R3hdm4Q4VBF2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
R3hdm4Q4VBF2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
R3hdm4Q4VBF2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.21■■□□□ 1.31
R3hdm4Q4VBF2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
R3hdm4Q4VBF2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
R3hdm4Q4VBF2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3hdm4Q4VBF2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
R3hdm4Q4VBF2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.2■■□□□ 1.3
R3hdm4Q4VBF2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3hdm4Q4VBF2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.19■■□□□ 1.3
R3hdm4Q4VBF2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
R3hdm4Q4VBF2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
R3hdm4Q4VBF2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
R3hdm4Q4VBF2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
R3hdm4Q4VBF2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
R3hdm4Q4VBF2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3hdm4Q4VBF2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.18■■□□□ 1.3
R3hdm4Q4VBF2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3hdm4Q4VBF2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
R3hdm4Q4VBF2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3hdm4Q4VBF2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
R3hdm4Q4VBF2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3hdm4Q4VBF2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
R3hdm4Q4VBF2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3hdm4Q4VBF2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3hdm4Q4VBF2 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.16■■□□□ 1.3
R3hdm4Q4VBF2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3hdm4Q4VBF2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
R3hdm4Q4VBF2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
R3hdm4Q4VBF2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
R3hdm4Q4VBF2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
R3hdm4Q4VBF2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
R3hdm4Q4VBF2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
R3hdm4Q4VBF2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
R3hdm4Q4VBF2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
R3hdm4Q4VBF2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
R3hdm4Q4VBF2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
R3hdm4Q4VBF2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.14■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms