Protein–RNA interactions for Protein: Q3UZD5

Prdm6, Putative histone-lysine N-methyltransferase PRDM6, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm6Q3UZD5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prdm6Q3UZD5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.29■■□□□ 1
Prdm6Q3UZD5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prdm6Q3UZD5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Prdm6Q3UZD5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prdm6Q3UZD5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm6Q3UZD5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prdm6Q3UZD5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm6Q3UZD5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm6Q3UZD5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Prdm6Q3UZD5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.28■■□□□ 1
Prdm6Q3UZD5 Gm43137-201ENSMUST00000198052 594 ntBASIC21.28■■□□□ 1
Prdm6Q3UZD5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.28■■□□□ 1
Prdm6Q3UZD5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm6Q3UZD5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm6Q3UZD5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prdm6Q3UZD5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.28■■□□□ 1
Prdm6Q3UZD5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Prdm6Q3UZD5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.27■■□□□ 1
Prdm6Q3UZD5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prdm6Q3UZD5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prdm6Q3UZD5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prdm6Q3UZD5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Prdm6Q3UZD5 Gm22325-201ENSMUST00000158904 308 ntBASIC21.27■■□□□ 1
Prdm6Q3UZD5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.27■■□□□ 1
Prdm6Q3UZD5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Prdm6Q3UZD5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.27■■□□□ 1
Prdm6Q3UZD5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
Prdm6Q3UZD5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm6Q3UZD5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm6Q3UZD5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm6Q3UZD5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.26■□□□□ 0.99
Prdm6Q3UZD5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.26■□□□□ 0.99
Prdm6Q3UZD5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.26■□□□□ 0.99
Prdm6Q3UZD5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm6Q3UZD5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm6Q3UZD5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.25■□□□□ 0.99
Prdm6Q3UZD5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prdm6Q3UZD5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prdm6Q3UZD5 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.24■□□□□ 0.99
Prdm6Q3UZD5 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.24■□□□□ 0.99
Prdm6Q3UZD5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.24■□□□□ 0.99
Prdm6Q3UZD5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prdm6Q3UZD5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Prdm6Q3UZD5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm6Q3UZD5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm6Q3UZD5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm6Q3UZD5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm6Q3UZD5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm6Q3UZD5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm6Q3UZD5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.22■□□□□ 0.99
Prdm6Q3UZD5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Prdm6Q3UZD5 Gm10849-201ENSMUST00000100397 618 ntBASIC21.21■□□□□ 0.99
Prdm6Q3UZD5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prdm6Q3UZD5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prdm6Q3UZD5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.21■□□□□ 0.99
Prdm6Q3UZD5 Gm8493-201ENSMUST00000196881 489 ntBASIC21.21■□□□□ 0.99
Prdm6Q3UZD5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prdm6Q3UZD5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prdm6Q3UZD5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Prdm6Q3UZD5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Prdm6Q3UZD5 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.2■□□□□ 0.98
Prdm6Q3UZD5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Prdm6Q3UZD5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm6Q3UZD5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm6Q3UZD5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm6Q3UZD5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm6Q3UZD5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm6Q3UZD5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.19■□□□□ 0.98
Prdm6Q3UZD5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm6Q3UZD5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
Prdm6Q3UZD5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Prdm6Q3UZD5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.18■□□□□ 0.98
Prdm6Q3UZD5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prdm6Q3UZD5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prdm6Q3UZD5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prdm6Q3UZD5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.17■□□□□ 0.98
Prdm6Q3UZD5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prdm6Q3UZD5 Gm10493-201ENSMUST00000097270 612 ntBASIC21.17■□□□□ 0.98
Prdm6Q3UZD5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Prdm6Q3UZD5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Prdm6Q3UZD5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prdm6Q3UZD5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm6Q3UZD5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm6Q3UZD5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.15■□□□□ 0.98
Prdm6Q3UZD5 Gm42642-201ENSMUST00000200683 355 ntBASIC21.15■□□□□ 0.98
Prdm6Q3UZD5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm6Q3UZD5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm6Q3UZD5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prdm6Q3UZD5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Prdm6Q3UZD5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prdm6Q3UZD5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prdm6Q3UZD5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.14■□□□□ 0.97
Prdm6Q3UZD5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.14■□□□□ 0.97
Prdm6Q3UZD5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Prdm6Q3UZD5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Prdm6Q3UZD5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prdm6Q3UZD5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prdm6Q3UZD5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prdm6Q3UZD5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms