Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim63Q38HM4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim63Q38HM4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim63Q38HM4 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.81■□□□□ 0.44
Trim63Q38HM4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim63Q38HM4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim63Q38HM4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim63Q38HM4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim63Q38HM4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim63Q38HM4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim63Q38HM4 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.81■□□□□ 0.44
Trim63Q38HM4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim63Q38HM4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim63Q38HM4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim63Q38HM4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim63Q38HM4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim63Q38HM4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim63Q38HM4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim63Q38HM4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim63Q38HM4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim63Q38HM4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim63Q38HM4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim63Q38HM4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim63Q38HM4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim63Q38HM4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim63Q38HM4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim63Q38HM4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim63Q38HM4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim63Q38HM4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trim63Q38HM4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim63Q38HM4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim63Q38HM4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trim63Q38HM4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim63Q38HM4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim63Q38HM4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim63Q38HM4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim63Q38HM4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim63Q38HM4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trim63Q38HM4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim63Q38HM4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim63Q38HM4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim63Q38HM4 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.75■□□□□ 0.43
Trim63Q38HM4 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.75■□□□□ 0.43
Trim63Q38HM4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim63Q38HM4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim63Q38HM4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim63Q38HM4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim63Q38HM4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim63Q38HM4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim63Q38HM4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim63Q38HM4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim63Q38HM4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim63Q38HM4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim63Q38HM4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim63Q38HM4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim63Q38HM4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim63Q38HM4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim63Q38HM4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim63Q38HM4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim63Q38HM4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim63Q38HM4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim63Q38HM4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim63Q38HM4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim63Q38HM4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim63Q38HM4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim63Q38HM4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim63Q38HM4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim63Q38HM4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim63Q38HM4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim63Q38HM4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim63Q38HM4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim63Q38HM4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim63Q38HM4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim63Q38HM4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim63Q38HM4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim63Q38HM4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim63Q38HM4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim63Q38HM4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim63Q38HM4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim63Q38HM4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Trim63Q38HM4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim63Q38HM4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim63Q38HM4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim63Q38HM4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim63Q38HM4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Trim63Q38HM4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim63Q38HM4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim63Q38HM4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim63Q38HM4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms