Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc1a3P56564 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Slc1a3P56564 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc1a3P56564 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc1a3P56564 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc1a3P56564 Gm45364-201ENSMUST00000210883 159 ntBASIC19.22■□□□□ 0.67
Slc1a3P56564 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.22■□□□□ 0.67
Slc1a3P56564 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc1a3P56564 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc1a3P56564 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc1a3P56564 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slc1a3P56564 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc1a3P56564 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a3P56564 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc1a3P56564 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a3P56564 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a3P56564 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a3P56564 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a3P56564 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.2■□□□□ 0.66
Slc1a3P56564 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a3P56564 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Slc1a3P56564 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a3P56564 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Slc1a3P56564 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slc1a3P56564 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a3P56564 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.19■□□□□ 0.66
Slc1a3P56564 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a3P56564 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a3P56564 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Slc1a3P56564 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Slc1a3P56564 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc1a3P56564 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc1a3P56564 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.18■□□□□ 0.66
Slc1a3P56564 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc1a3P56564 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc1a3P56564 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc1a3P56564 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Slc1a3P56564 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc1a3P56564 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc1a3P56564 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Slc1a3P56564 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.17■□□□□ 0.66
Slc1a3P56564 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a3P56564 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a3P56564 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a3P56564 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Slc1a3P56564 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a3P56564 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a3P56564 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a3P56564 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a3P56564 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a3P56564 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a3P56564 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Slc1a3P56564 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Slc1a3P56564 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc1a3P56564 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc1a3P56564 Notumos-201ENSMUST00000151998 2659 ntBASIC19.14■□□□□ 0.65
Slc1a3P56564 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc1a3P56564 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc1a3P56564 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc1a3P56564 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Slc1a3P56564 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc1a3P56564 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Slc1a3P56564 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Slc1a3P56564 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a3P56564 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a3P56564 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Slc1a3P56564 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a3P56564 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Slc1a3P56564 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a3P56564 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a3P56564 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a3P56564 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a3P56564 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a3P56564 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a3P56564 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.12■□□□□ 0.65
Slc1a3P56564 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a3P56564 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a3P56564 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Slc1a3P56564 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a3P56564 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a3P56564 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a3P56564 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a3P56564 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a3P56564 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a3P56564 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a3P56564 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.11■□□□□ 0.65
Slc1a3P56564 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a3P56564 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a3P56564 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc1a3P56564 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Slc1a3P56564 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
Slc1a3P56564 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc1a3P56564 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc1a3P56564 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc1a3P56564 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Slc1a3P56564 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc1a3P56564 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc1a3P56564 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.09■□□□□ 0.65
Slc1a3P56564 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc1a3P56564 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms