Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thbs1P35441 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.85■□□□□ 0.77
Thbs1P35441 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thbs1P35441 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.85■□□□□ 0.77
Thbs1P35441 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.85■□□□□ 0.77
Thbs1P35441 Gm12366-201ENSMUST00000121722 873 ntBASIC19.85■□□□□ 0.77
Thbs1P35441 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.85■□□□□ 0.77
Thbs1P35441 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thbs1P35441 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.85■□□□□ 0.77
Thbs1P35441 Gm5786-201ENSMUST00000085368 882 ntBASIC19.85■□□□□ 0.77
Thbs1P35441 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Thbs1P35441 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Thbs1P35441 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Thbs1P35441 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.84■□□□□ 0.77
Thbs1P35441 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thbs1P35441 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thbs1P35441 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thbs1P35441 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thbs1P35441 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.84■□□□□ 0.77
Thbs1P35441 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Thbs1P35441 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Thbs1P35441 Gm7332-201ENSMUST00000118351 454 ntBASIC19.83■□□□□ 0.77
Thbs1P35441 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.83■□□□□ 0.77
Thbs1P35441 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.83■□□□□ 0.77
Thbs1P35441 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Thbs1P35441 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thbs1P35441 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Thbs1P35441 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thbs1P35441 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thbs1P35441 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Thbs1P35441 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thbs1P35441 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Thbs1P35441 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thbs1P35441 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thbs1P35441 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thbs1P35441 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thbs1P35441 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thbs1P35441 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thbs1P35441 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thbs1P35441 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs1P35441 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs1P35441 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs1P35441 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs1P35441 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.8■□□□□ 0.76
Thbs1P35441 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs1P35441 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Thbs1P35441 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Thbs1P35441 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.79■□□□□ 0.76
Thbs1P35441 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thbs1P35441 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.79■□□□□ 0.76
Thbs1P35441 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thbs1P35441 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thbs1P35441 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thbs1P35441 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.79■□□□□ 0.76
Thbs1P35441 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.79■□□□□ 0.76
Thbs1P35441 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thbs1P35441 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thbs1P35441 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thbs1P35441 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thbs1P35441 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Thbs1P35441 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thbs1P35441 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thbs1P35441 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.78■□□□□ 0.76
Thbs1P35441 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thbs1P35441 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Thbs1P35441 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.77■□□□□ 0.76
Thbs1P35441 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thbs1P35441 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.77■□□□□ 0.76
Thbs1P35441 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thbs1P35441 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Thbs1P35441 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thbs1P35441 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.77■□□□□ 0.75
Thbs1P35441 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Thbs1P35441 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thbs1P35441 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Thbs1P35441 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.76■□□□□ 0.75
Thbs1P35441 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.76■□□□□ 0.75
Thbs1P35441 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thbs1P35441 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thbs1P35441 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thbs1P35441 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thbs1P35441 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.75■□□□□ 0.75
Thbs1P35441 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Thbs1P35441 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thbs1P35441 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.75■□□□□ 0.75
Thbs1P35441 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thbs1P35441 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.74■□□□□ 0.75
Thbs1P35441 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.74■□□□□ 0.75
Thbs1P35441 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thbs1P35441 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.74■□□□□ 0.75
Thbs1P35441 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Thbs1P35441 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thbs1P35441 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thbs1P35441 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thbs1P35441 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Thbs1P35441 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thbs1P35441 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thbs1P35441 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Thbs1P35441 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thbs1P35441 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms