Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hbb-b1P02088 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hbb-b1P02088 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.18■□□□□ 0.02
Hbb-b1P02088 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hbb-b1P02088 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Hbb-b1P02088 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hbb-b1P02088 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.17■□□□□ 0.02
Hbb-b1P02088 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hbb-b1P02088 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hbb-b1P02088 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hbb-b1P02088 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Hbb-b1P02088 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hbb-b1P02088 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hbb-b1P02088 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hbb-b1P02088 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hbb-b1P02088 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hbb-b1P02088 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hbb-b1P02088 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hbb-b1P02088 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hbb-b1P02088 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hbb-b1P02088 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hbb-b1P02088 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hbb-b1P02088 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.15■□□□□ 0.02
Hbb-b1P02088 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hbb-b1P02088 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hbb-b1P02088 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hbb-b1P02088 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hbb-b1P02088 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hbb-b1P02088 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hbb-b1P02088 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hbb-b1P02088 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hbb-b1P02088 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hbb-b1P02088 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hbb-b1P02088 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hbb-b1P02088 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hbb-b1P02088 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hbb-b1P02088 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hbb-b1P02088 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.13■□□□□ 0.01
Hbb-b1P02088 Gm30023-201ENSMUST00000197970 889 ntBASIC15.13■□□□□ 0.01
Hbb-b1P02088 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hbb-b1P02088 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hbb-b1P02088 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hbb-b1P02088 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hbb-b1P02088 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hbb-b1P02088 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hbb-b1P02088 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hbb-b1P02088 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hbb-b1P02088 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Hbb-b1P02088 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hbb-b1P02088 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hbb-b1P02088 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hbb-b1P02088 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hbb-b1P02088 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hbb-b1P02088 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hbb-b1P02088 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hbb-b1P02088 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.11■□□□□ 0.01
Hbb-b1P02088 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hbb-b1P02088 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Hbb-b1P02088 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hbb-b1P02088 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hbb-b1P02088 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hbb-b1P02088 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hbb-b1P02088 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hbb-b1P02088 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hbb-b1P02088 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hbb-b1P02088 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.1■□□□□ 0.01
Hbb-b1P02088 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hbb-b1P02088 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hbb-b1P02088 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hbb-b1P02088 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hbb-b1P02088 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hbb-b1P02088 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hbb-b1P02088 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hbb-b1P02088 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hbb-b1P02088 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hbb-b1P02088 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.09■□□□□ 0.01
Hbb-b1P02088 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hbb-b1P02088 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hbb-b1P02088 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hbb-b1P02088 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Hbb-b1P02088 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hbb-b1P02088 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hbb-b1P02088 Gm22567-201ENSMUST00000175542 342 ntBASIC15.08■□□□□ 0
Hbb-b1P02088 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hbb-b1P02088 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hbb-b1P02088 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hbb-b1P02088 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Hbb-b1P02088 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 1495.4 ms