Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01643 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.1■□□□□ 0.33
P01643 Gm7417-201ENSMUST00000192950 473 ntBASIC17.1■□□□□ 0.33
P01643 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01643 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01643 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P01643 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.09■□□□□ 0.33
P01643 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.09■□□□□ 0.33
P01643 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.09■□□□□ 0.33
P01643 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01643 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01643 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
P01643 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01643 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01643 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01643 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.08■□□□□ 0.32
P01643 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01643 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.08■□□□□ 0.32
P01643 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.08■□□□□ 0.32
P01643 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.08■□□□□ 0.32
P01643 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.07■□□□□ 0.32
P01643 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01643 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
P01643 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01643 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.07■□□□□ 0.32
P01643 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.07■□□□□ 0.32
P01643 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.07■□□□□ 0.32
P01643 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01643 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
P01643 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01643 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.07■□□□□ 0.32
P01643 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01643 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01643 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
P01643 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.06■□□□□ 0.32
P01643 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01643 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01643 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01643 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P01643 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P01643 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01643 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.05■□□□□ 0.32
P01643 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01643 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01643 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01643 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01643 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P01643 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
P01643 Gm40881-201ENSMUST00000223397 166 ntBASIC17.04■□□□□ 0.32
P01643 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01643 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
P01643 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01643 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.03■□□□□ 0.32
P01643 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01643 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.03■□□□□ 0.32
P01643 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.03■□□□□ 0.32
P01643 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01643 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01643 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01643 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01643 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01643 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01643 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01643 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01643 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01643 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01643 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01643 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01643 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.02■□□□□ 0.32
P01643 Gm10399-202ENSMUST00000202768 748 ntBASIC17.02■□□□□ 0.32
P01643 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01643 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.02■□□□□ 0.31
P01643 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P01643 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01643 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P01643 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
P01643 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P01643 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17■□□□□ 0.31
P01643 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
P01643 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
P01643 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
P01643 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01643 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17■□□□□ 0.31
P01643 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01643 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01643 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01643 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01643 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
P01643 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01643 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.99■□□□□ 0.31
P01643 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
P01643 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
P01643 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01643 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01643 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
P01643 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01643 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01643 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P01643 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01643 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms