Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh16O88338 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.94■□□□□ 0.94
Cdh16O88338 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh16O88338 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh16O88338 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh16O88338 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh16O88338 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh16O88338 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh16O88338 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh16O88338 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh16O88338 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh16O88338 Gm22567-201ENSMUST00000175542 342 ntBASIC20.92■□□□□ 0.94
Cdh16O88338 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cdh16O88338 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh16O88338 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh16O88338 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh16O88338 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Cdh16O88338 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh16O88338 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh16O88338 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh16O88338 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh16O88338 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh16O88338 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh16O88338 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh16O88338 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh16O88338 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh16O88338 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.89■□□□□ 0.94
Cdh16O88338 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh16O88338 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.89■□□□□ 0.93
Cdh16O88338 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh16O88338 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
Cdh16O88338 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh16O88338 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh16O88338 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh16O88338 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh16O88338 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh16O88338 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh16O88338 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh16O88338 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh16O88338 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh16O88338 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
Cdh16O88338 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.88■□□□□ 0.93
Cdh16O88338 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cdh16O88338 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh16O88338 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh16O88338 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh16O88338 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh16O88338 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh16O88338 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh16O88338 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh16O88338 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Cdh16O88338 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh16O88338 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Cdh16O88338 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh16O88338 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cdh16O88338 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh16O88338 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh16O88338 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh16O88338 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh16O88338 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh16O88338 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh16O88338 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh16O88338 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh16O88338 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh16O88338 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.85■□□□□ 0.93
Cdh16O88338 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.85■□□□□ 0.93
Cdh16O88338 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cdh16O88338 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh16O88338 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
Cdh16O88338 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cdh16O88338 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh16O88338 Gm7432-201ENSMUST00000210343 879 ntBASIC20.84■□□□□ 0.93
Cdh16O88338 Gm4799-201ENSMUST00000095396 657 ntBASIC20.84■□□□□ 0.93
Cdh16O88338 Iqck-206ENSMUST00000208658 2891 ntBASIC20.84■□□□□ 0.93
Cdh16O88338 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh16O88338 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh16O88338 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdh16O88338 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdh16O88338 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.83■□□□□ 0.92
Cdh16O88338 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh16O88338 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh16O88338 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cdh16O88338 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh16O88338 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh16O88338 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.82■□□□□ 0.92
Cdh16O88338 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cdh16O88338 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh16O88338 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh16O88338 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cdh16O88338 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.81■□□□□ 0.92
Cdh16O88338 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh16O88338 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh16O88338 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh16O88338 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cdh16O88338 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh16O88338 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh16O88338 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cdh16O88338 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh16O88338 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh16O88338 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms