Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6dO55057 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6dO55057 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6dO55057 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6dO55057 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6dO55057 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6dO55057 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Pde6dO55057 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.91■□□□□ 0.3
Pde6dO55057 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pde6dO55057 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6dO55057 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6dO55057 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.9■□□□□ 0.3
Pde6dO55057 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pde6dO55057 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6dO55057 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.9■□□□□ 0.3
Pde6dO55057 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6dO55057 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6dO55057 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6dO55057 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6dO55057 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6dO55057 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6dO55057 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pde6dO55057 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pde6dO55057 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6dO55057 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pde6dO55057 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Pde6dO55057 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pde6dO55057 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.87■□□□□ 0.29
Pde6dO55057 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6dO55057 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6dO55057 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6dO55057 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6dO55057 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pde6dO55057 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pde6dO55057 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pde6dO55057 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pde6dO55057 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pde6dO55057 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pde6dO55057 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pde6dO55057 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pde6dO55057 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pde6dO55057 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pde6dO55057 Gm9397-201ENSMUST00000200125 605 ntBASIC16.85■□□□□ 0.29
Pde6dO55057 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pde6dO55057 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Pde6dO55057 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.85■□□□□ 0.29
Pde6dO55057 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pde6dO55057 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pde6dO55057 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pde6dO55057 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pde6dO55057 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.84■□□□□ 0.29
Pde6dO55057 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.84■□□□□ 0.29
Pde6dO55057 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pde6dO55057 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pde6dO55057 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pde6dO55057 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6dO55057 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.83■□□□□ 0.28
Pde6dO55057 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
Pde6dO55057 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6dO55057 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6dO55057 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6dO55057 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6dO55057 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6dO55057 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6dO55057 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6dO55057 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.82■□□□□ 0.28
Pde6dO55057 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.82■□□□□ 0.28
Pde6dO55057 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6dO55057 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.82■□□□□ 0.28
Pde6dO55057 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6dO55057 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6dO55057 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6dO55057 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6dO55057 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6dO55057 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6dO55057 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6dO55057 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6dO55057 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6dO55057 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.8■□□□□ 0.28
Pde6dO55057 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6dO55057 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6dO55057 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6dO55057 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6dO55057 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.8■□□□□ 0.28
Pde6dO55057 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pde6dO55057 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6dO55057 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6dO55057 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6dO55057 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6dO55057 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pde6dO55057 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6dO55057 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6dO55057 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pde6dO55057 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6dO55057 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pde6dO55057 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.77■□□□□ 0.28
Pde6dO55057 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6dO55057 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pde6dO55057 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6dO55057 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms