Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SncaO55042 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SncaO55042 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SncaO55042 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SncaO55042 Gm6311-201ENSMUST00000073790 878 ntBASIC17.67■□□□□ 0.42
SncaO55042 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SncaO55042 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SncaO55042 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SncaO55042 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.66■□□□□ 0.42
SncaO55042 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SncaO55042 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.66■□□□□ 0.42
SncaO55042 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SncaO55042 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SncaO55042 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SncaO55042 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.65■□□□□ 0.42
SncaO55042 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SncaO55042 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SncaO55042 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SncaO55042 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SncaO55042 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SncaO55042 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.65■□□□□ 0.42
SncaO55042 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SncaO55042 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SncaO55042 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SncaO55042 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SncaO55042 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SncaO55042 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
SncaO55042 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SncaO55042 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SncaO55042 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SncaO55042 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SncaO55042 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SncaO55042 Gm44428-201ENSMUST00000204474 874 ntBASIC17.63■□□□□ 0.41
SncaO55042 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SncaO55042 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SncaO55042 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SncaO55042 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SncaO55042 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SncaO55042 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SncaO55042 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SncaO55042 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SncaO55042 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SncaO55042 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SncaO55042 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SncaO55042 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.62■□□□□ 0.41
SncaO55042 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SncaO55042 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SncaO55042 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SncaO55042 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SncaO55042 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SncaO55042 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SncaO55042 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SncaO55042 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SncaO55042 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SncaO55042 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.6■□□□□ 0.41
SncaO55042 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.6■□□□□ 0.41
SncaO55042 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.6■□□□□ 0.41
SncaO55042 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SncaO55042 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SncaO55042 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SncaO55042 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.6■□□□□ 0.41
SncaO55042 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SncaO55042 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SncaO55042 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SncaO55042 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SncaO55042 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SncaO55042 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SncaO55042 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SncaO55042 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SncaO55042 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SncaO55042 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SncaO55042 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SncaO55042 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SncaO55042 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SncaO55042 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SncaO55042 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.58■□□□□ 0.4
SncaO55042 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SncaO55042 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SncaO55042 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SncaO55042 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.57■□□□□ 0.4
SncaO55042 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SncaO55042 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SncaO55042 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SncaO55042 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SncaO55042 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SncaO55042 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.57■□□□□ 0.4
SncaO55042 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SncaO55042 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SncaO55042 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SncaO55042 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.56■□□□□ 0.4
SncaO55042 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SncaO55042 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SncaO55042 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SncaO55042 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SncaO55042 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SncaO55042 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.56■□□□□ 0.4
SncaO55042 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SncaO55042 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SncaO55042 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SncaO55042 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms