Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DffbO54788 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.32■□□□□ 0.52
DffbO54788 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DffbO54788 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
DffbO54788 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DffbO54788 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DffbO54788 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DffbO54788 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DffbO54788 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DffbO54788 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DffbO54788 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
DffbO54788 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DffbO54788 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DffbO54788 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DffbO54788 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DffbO54788 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
DffbO54788 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DffbO54788 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DffbO54788 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.3■□□□□ 0.52
DffbO54788 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DffbO54788 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DffbO54788 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DffbO54788 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
DffbO54788 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
DffbO54788 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DffbO54788 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DffbO54788 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DffbO54788 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
DffbO54788 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DffbO54788 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.28■□□□□ 0.52
DffbO54788 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DffbO54788 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.28■□□□□ 0.52
DffbO54788 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
DffbO54788 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DffbO54788 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DffbO54788 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
DffbO54788 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DffbO54788 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DffbO54788 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DffbO54788 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
DffbO54788 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
DffbO54788 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
DffbO54788 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.27■□□□□ 0.52
DffbO54788 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
DffbO54788 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
DffbO54788 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
DffbO54788 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
DffbO54788 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.26■□□□□ 0.51
DffbO54788 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
DffbO54788 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.26■□□□□ 0.51
DffbO54788 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DffbO54788 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.26■□□□□ 0.51
DffbO54788 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DffbO54788 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DffbO54788 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DffbO54788 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DffbO54788 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
DffbO54788 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DffbO54788 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DffbO54788 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DffbO54788 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
DffbO54788 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DffbO54788 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.25■□□□□ 0.51
DffbO54788 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.25■□□□□ 0.51
DffbO54788 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DffbO54788 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
DffbO54788 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
DffbO54788 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DffbO54788 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
DffbO54788 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
DffbO54788 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DffbO54788 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DffbO54788 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DffbO54788 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DffbO54788 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.23■□□□□ 0.51
DffbO54788 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DffbO54788 Gm6311-201ENSMUST00000073790 878 ntBASIC18.23■□□□□ 0.51
DffbO54788 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DffbO54788 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DffbO54788 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DffbO54788 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DffbO54788 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DffbO54788 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DffbO54788 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DffbO54788 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
DffbO54788 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.22■□□□□ 0.51
DffbO54788 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.22■□□□□ 0.51
DffbO54788 Gm44428-201ENSMUST00000204474 874 ntBASIC18.22■□□□□ 0.51
DffbO54788 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DffbO54788 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DffbO54788 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
DffbO54788 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DffbO54788 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
DffbO54788 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
DffbO54788 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DffbO54788 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DffbO54788 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
DffbO54788 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DffbO54788 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DffbO54788 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms