Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.54■□□□□ 0.88
Polr2jO08740 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Polr2jO08740 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Polr2jO08740 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Polr2jO08740 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Polr2jO08740 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Polr2jO08740 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2jO08740 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.52■□□□□ 0.88
Polr2jO08740 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Polr2jO08740 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2jO08740 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.52■□□□□ 0.88
Polr2jO08740 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2jO08740 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.52■□□□□ 0.88
Polr2jO08740 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2jO08740 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.51■□□□□ 0.87
Polr2jO08740 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Polr2jO08740 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Polr2jO08740 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr2jO08740 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Polr2jO08740 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.5■□□□□ 0.87
Polr2jO08740 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.5■□□□□ 0.87
Polr2jO08740 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.49■□□□□ 0.87
Polr2jO08740 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr2jO08740 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.49■□□□□ 0.87
Polr2jO08740 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr2jO08740 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr2jO08740 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Polr2jO08740 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr2jO08740 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.48■□□□□ 0.87
Polr2jO08740 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.48■□□□□ 0.87
Polr2jO08740 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Polr2jO08740 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Polr2jO08740 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr2jO08740 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Polr2jO08740 Gm6311-201ENSMUST00000073790 878 ntBASIC20.47■□□□□ 0.87
Polr2jO08740 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Polr2jO08740 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr2jO08740 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr2jO08740 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Polr2jO08740 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.46■□□□□ 0.87
Polr2jO08740 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Polr2jO08740 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr2jO08740 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr2jO08740 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Polr2jO08740 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Polr2jO08740 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Polr2jO08740 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Polr2jO08740 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Polr2jO08740 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
Polr2jO08740 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Polr2jO08740 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Polr2jO08740 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.43■□□□□ 0.86
Polr2jO08740 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.43■□□□□ 0.86
Polr2jO08740 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Polr2jO08740 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr2jO08740 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms