Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Gm3727J3QM54 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm3727J3QM54 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3727J3QM54 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3727J3QM54 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3727J3QM54 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.19■□□□□ 0.5
Gm3727J3QM54 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm3727J3QM54 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3727J3QM54 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Gm3727J3QM54 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3727J3QM54 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3727J3QM54 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3727J3QM54 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Gm3727J3QM54 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3727J3QM54 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3727J3QM54 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3727J3QM54 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3727J3QM54 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3727J3QM54 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3727J3QM54 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3727J3QM54 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3727J3QM54 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3727J3QM54 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3727J3QM54 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Gm3727J3QM54 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm3727J3QM54 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm3727J3QM54 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm3727J3QM54 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.16■□□□□ 0.5
Gm3727J3QM54 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm3727J3QM54 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm3727J3QM54 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm3727J3QM54 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm3727J3QM54 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Gm3727J3QM54 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm3727J3QM54 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm3727J3QM54 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm3727J3QM54 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Gm3727J3QM54 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm3727J3QM54 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm3727J3QM54 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm3727J3QM54 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm3727J3QM54 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm3727J3QM54 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gm3727J3QM54 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Gm3727J3QM54 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm3727J3QM54 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm3727J3QM54 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Gm3727J3QM54 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm3727J3QM54 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Gm3727J3QM54 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm3727J3QM54 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm3727J3QM54 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm3727J3QM54 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm3727J3QM54 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm3727J3QM54 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm3727J3QM54 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm3727J3QM54 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm3727J3QM54 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.11■□□□□ 0.49
Gm3727J3QM54 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm3727J3QM54 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3727J3QM54 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3727J3QM54 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Gm3727J3QM54 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3727J3QM54 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3727J3QM54 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Gm3727J3QM54 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3727J3QM54 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3727J3QM54 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3727J3QM54 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3727J3QM54 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3727J3QM54 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3727J3QM54 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3727J3QM54 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3727J3QM54 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3727J3QM54 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3727J3QM54 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3727J3QM54 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3727J3QM54 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Gm3727J3QM54 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Gm3727J3QM54 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Gm3727J3QM54 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3727J3QM54 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3727J3QM54 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3727J3QM54 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3727J3QM54 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Gm3727J3QM54 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3727J3QM54 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3727J3QM54 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 161.9 ms