Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5878E9PUB3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm5878E9PUB3 Gm11687-201ENSMUST00000118911 886 ntBASIC16.14■□□□□ 0.17
Gm5878E9PUB3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm5878E9PUB3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm5878E9PUB3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5878E9PUB3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5878E9PUB3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5878E9PUB3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm5878E9PUB3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5878E9PUB3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5878E9PUB3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5878E9PUB3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm5878E9PUB3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5878E9PUB3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5878E9PUB3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5878E9PUB3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5878E9PUB3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5878E9PUB3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm5878E9PUB3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5878E9PUB3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm5878E9PUB3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.11■□□□□ 0.17
Gm5878E9PUB3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5878E9PUB3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5878E9PUB3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5878E9PUB3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5878E9PUB3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5878E9PUB3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5878E9PUB3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5878E9PUB3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.08■□□□□ 0.16
Gm5878E9PUB3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm5878E9PUB3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.08■□□□□ 0.16
Gm5878E9PUB3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm5878E9PUB3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm5878E9PUB3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5878E9PUB3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5878E9PUB3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.05■□□□□ 0.16
Gm5878E9PUB3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Gm5878E9PUB3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5878E9PUB3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5878E9PUB3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Gm5878E9PUB3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.04■□□□□ 0.16
Gm5878E9PUB3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Gm5878E9PUB3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5878E9PUB3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5878E9PUB3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5878E9PUB3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5878E9PUB3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5878E9PUB3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5878E9PUB3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5878E9PUB3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5878E9PUB3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5878E9PUB3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5878E9PUB3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5878E9PUB3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5878E9PUB3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5878E9PUB3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5878E9PUB3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5878E9PUB3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5878E9PUB3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5878E9PUB3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5878E9PUB3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5878E9PUB3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Gm5878E9PUB3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms